Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21■□□□□ 0.95
NR1H4Q96RI1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21■□□□□ 0.95
NR1H4Q96RI1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21■□□□□ 0.95
NR1H4Q96RI1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NR1H4Q96RI1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NR1H4Q96RI1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21■□□□□ 0.95
NR1H4Q96RI1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NR1H4Q96RI1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 AC005229.4-201ENST00000610085 2198 ntBASIC20.98■□□□□ 0.95
NR1H4Q96RI1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 LINC01521-201ENST00000504184 1943 ntBASIC20.98■□□□□ 0.95
NR1H4Q96RI1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NR1H4Q96RI1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 AC007952.6-201ENST00000573168 2673 ntBASIC20.97■□□□□ 0.95
NR1H4Q96RI1 AC003957.1-201ENST00000625108 2673 ntBASIC20.97■□□□□ 0.95
NR1H4Q96RI1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NR1H4Q96RI1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.96■□□□□ 0.95
NR1H4Q96RI1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NR1H4Q96RI1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NR1H4Q96RI1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NR1H4Q96RI1 FAM99A-202ENST00000538190 1989 ntBASIC20.94■□□□□ 0.94
NR1H4Q96RI1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 LINC01971-201ENST00000617888 1048 ntBASIC20.93■□□□□ 0.94
NR1H4Q96RI1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H4Q96RI1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 AC080038.3-201ENST00000623346 1952 ntBASIC20.92■□□□□ 0.94
NR1H4Q96RI1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NR1H4Q96RI1 AL161729.1-201ENST00000604104 1402 ntBASIC20.92■□□□□ 0.94
NR1H4Q96RI1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms