Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
DUX3Q96PT4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
DUX3Q96PT4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
DUX3Q96PT4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 AC099791.1-201ENST00000416440 715 ntBASIC17.28■□□□□ 0.36
DUX3Q96PT4 AC091305.1-201ENST00000479476 895 ntBASIC17.28■□□□□ 0.36
DUX3Q96PT4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 AL138724.1-201ENST00000606771 1088 ntBASIC17.28■□□□□ 0.36
DUX3Q96PT4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 LINC00543-201ENST00000567234 1845 ntBASIC17.28■□□□□ 0.36
DUX3Q96PT4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DUX3Q96PT4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DUX3Q96PT4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DUX3Q96PT4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DUX3Q96PT4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
DUX3Q96PT4 CA15P2-201ENST00000611168 834 ntBASIC17.27■□□□□ 0.36
DUX3Q96PT4 AC136469.2-201ENST00000623944 1028 ntBASIC17.27■□□□□ 0.36
DUX3Q96PT4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
DUX3Q96PT4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
DUX3Q96PT4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.27■□□□□ 0.35
DUX3Q96PT4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DUX3Q96PT4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX3Q96PT4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.26■□□□□ 0.35
DUX3Q96PT4 AC027682.1-201ENST00000562846 899 ntBASIC17.26■□□□□ 0.35
DUX3Q96PT4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.26■□□□□ 0.35
DUX3Q96PT4 AC141586.4-201ENST00000624558 1573 ntBASIC17.26■□□□□ 0.35
DUX3Q96PT4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.26■□□□□ 0.35
DUX3Q96PT4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
DUX3Q96PT4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX3Q96PT4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX3Q96PT4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.25■□□□□ 0.35
DUX3Q96PT4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.25■□□□□ 0.35
DUX3Q96PT4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
DUX3Q96PT4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
DUX3Q96PT4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
DUX3Q96PT4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
DUX3Q96PT4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.24■□□□□ 0.35
DUX3Q96PT4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 RASA4CP-201ENST00000424092 1398 ntBASIC17.24■□□□□ 0.35
DUX3Q96PT4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
DUX3Q96PT4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DUX3Q96PT4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DUX3Q96PT4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.23■□□□□ 0.35
DUX3Q96PT4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.23■□□□□ 0.35
DUX3Q96PT4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUX3Q96PT4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUX3Q96PT4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUX3Q96PT4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DUX3Q96PT4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.23■□□□□ 0.35
DUX3Q96PT4 RARRES2P6-201ENST00000567333 442 ntBASIC17.23■□□□□ 0.35
DUX3Q96PT4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms