Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COX4I2Q96KJ9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.49■□□□□ 0.87
COX4I2Q96KJ9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COX4I2Q96KJ9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COX4I2Q96KJ9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.46■□□□□ 0.87
COX4I2Q96KJ9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 MIR638-201ENST00000385237 100 ntBASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COX4I2Q96KJ9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 KRT125P-201ENST00000546827 989 ntBASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 AC087393.1-201ENST00000582896 145 ntBASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.44■□□□□ 0.86
COX4I2Q96KJ9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.43■□□□□ 0.86
COX4I2Q96KJ9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 748.3 ms