Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.44■■■□□ 2.62
USP47Q96K76 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.44■■■□□ 2.62
USP47Q96K76 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
USP47Q96K76 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 AL499627.2-201ENST00000606283 725 ntBASIC31.43■■■□□ 2.62
USP47Q96K76 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 DUSP8P3-201ENST00000399571 1760 ntBASIC31.43■■■□□ 2.62
USP47Q96K76 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
USP47Q96K76 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
USP47Q96K76 AC024257.2-201ENST00000549699 147 ntBASIC31.43■■■□□ 2.62
USP47Q96K76 AL139246.5-201ENST00000606645 996 ntBASIC31.43■■■□□ 2.62
USP47Q96K76 AL136162.1-201ENST00000607711 1078 ntBASIC31.43■■■□□ 2.62
USP47Q96K76 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.42■■■□□ 2.62
USP47Q96K76 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
USP47Q96K76 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
USP47Q96K76 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
USP47Q96K76 AL138724.1-201ENST00000606771 1088 ntBASIC31.42■■■□□ 2.62
USP47Q96K76 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.42■■■□□ 2.62
USP47Q96K76 AC011298.3-201ENST00000615796 283 ntBASIC31.42■■■□□ 2.62
USP47Q96K76 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
USP47Q96K76 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
USP47Q96K76 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC31.41■■■□□ 2.62
USP47Q96K76 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC31.41■■■□□ 2.62
USP47Q96K76 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.41■■■□□ 2.62
USP47Q96K76 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
USP47Q96K76 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.41■■■□□ 2.62
USP47Q96K76 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP47Q96K76 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP47Q96K76 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.4■■■□□ 2.62
USP47Q96K76 AC135279.3-201ENST00000610945 1311 ntBASIC31.4■■■□□ 2.62
USP47Q96K76 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP47Q96K76 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC31.4■■■□□ 2.62
USP47Q96K76 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
USP47Q96K76 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
USP47Q96K76 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
USP47Q96K76 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
USP47Q96K76 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
USP47Q96K76 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.39■■■□□ 2.62
USP47Q96K76 AC106739.1-201ENST00000617035 715 ntBASIC31.39■■■□□ 2.62
USP47Q96K76 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
USP47Q96K76 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
USP47Q96K76 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP47Q96K76 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.38■■■□□ 2.61
USP47Q96K76 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.38■■■□□ 2.61
USP47Q96K76 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.38■■■□□ 2.61
USP47Q96K76 AC136469.2-201ENST00000623944 1028 ntBASIC31.38■■■□□ 2.61
USP47Q96K76 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
USP47Q96K76 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
USP47Q96K76 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.37■■■□□ 2.61
USP47Q96K76 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.37■■■□□ 2.61
USP47Q96K76 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.37■■■□□ 2.61
USP47Q96K76 MIR4767-201ENST00000582827 78 ntBASIC31.37■■■□□ 2.61
USP47Q96K76 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
USP47Q96K76 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.37■■■□□ 2.61
USP47Q96K76 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.37■■■□□ 2.61
USP47Q96K76 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.37■■■□□ 2.61
USP47Q96K76 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
USP47Q96K76 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC31.36■■■□□ 2.61
USP47Q96K76 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.36■■■□□ 2.61
USP47Q96K76 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.36■■■□□ 2.61
USP47Q96K76 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
USP47Q96K76 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP47Q96K76 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC31.35■■■□□ 2.61
USP47Q96K76 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.35■■■□□ 2.61
USP47Q96K76 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP47Q96K76 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
USP47Q96K76 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP47Q96K76 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
USP47Q96K76 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.35■■■□□ 2.61
USP47Q96K76 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.34■■■□□ 2.61
USP47Q96K76 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.34■■■□□ 2.61
USP47Q96K76 AL031432.3-201ENST00000607698 485 ntBASIC31.34■■■□□ 2.61
USP47Q96K76 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.34■■■□□ 2.61
USP47Q96K76 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP47Q96K76 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.34■■■□□ 2.61
USP47Q96K76 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
USP47Q96K76 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
USP47Q96K76 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
USP47Q96K76 AC133637.1-201ENST00000624115 1537 ntBASIC31.34■■■□□ 2.61
USP47Q96K76 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
USP47Q96K76 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms