Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RFT1Q96AA3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RFT1Q96AA3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RFT1Q96AA3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFT1Q96AA3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
RFT1Q96AA3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RFT1Q96AA3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.64■□□□□ 0.74
RFT1Q96AA3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RFT1Q96AA3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RFT1Q96AA3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFT1Q96AA3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFT1Q96AA3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RFT1Q96AA3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.64■□□□□ 0.73
RFT1Q96AA3 AC139795.1-202ENST00000500444 432 ntBASIC19.64■□□□□ 0.73
RFT1Q96AA3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RFT1Q96AA3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.64■□□□□ 0.73
RFT1Q96AA3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.64■□□□□ 0.73
RFT1Q96AA3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
RFT1Q96AA3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.64■□□□□ 0.73
RFT1Q96AA3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RFT1Q96AA3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFT1Q96AA3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.63■□□□□ 0.73
RFT1Q96AA3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RFT1Q96AA3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFT1Q96AA3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.62■□□□□ 0.73
RFT1Q96AA3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RFT1Q96AA3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RFT1Q96AA3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFT1Q96AA3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFT1Q96AA3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.62■□□□□ 0.73
RFT1Q96AA3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFT1Q96AA3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
RFT1Q96AA3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFT1Q96AA3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.6■□□□□ 0.73
RFT1Q96AA3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 NTF6A-201ENST00000591175 560 ntBASIC19.6■□□□□ 0.73
RFT1Q96AA3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RFT1Q96AA3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.59■□□□□ 0.73
RFT1Q96AA3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.59■□□□□ 0.73
RFT1Q96AA3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
RFT1Q96AA3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RFT1Q96AA3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RFT1Q96AA3 AL022069.1-201ENST00000568025 1636 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms