Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LNX1Q8TBB1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.34■■□□□ 1.49
LNX1Q8TBB1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
LNX1Q8TBB1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.33■■□□□ 1.49
LNX1Q8TBB1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
LNX1Q8TBB1 SYT6-210ENST00000641643 1587 ntBASIC24.33■■□□□ 1.48
LNX1Q8TBB1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 AC092171.4-201ENST00000609130 632 ntBASIC24.32■■□□□ 1.48
LNX1Q8TBB1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
LNX1Q8TBB1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 ALDH1A3-203ENST00000557963 1670 ntBASIC24.31■■□□□ 1.48
LNX1Q8TBB1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 AC099791.2-201ENST00000605725 427 ntBASIC24.31■■□□□ 1.48
LNX1Q8TBB1 AL136967.2-201ENST00000623968 743 ntBASIC24.31■■□□□ 1.48
LNX1Q8TBB1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LNX1Q8TBB1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 AC092068.2-201ENST00000590491 1708 ntBASIC24.3■■□□□ 1.48
LNX1Q8TBB1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LNX1Q8TBB1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 SERBP1P1-201ENST00000396021 1160 ntBASIC24.29■■□□□ 1.48
LNX1Q8TBB1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.29■■□□□ 1.48
LNX1Q8TBB1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
LNX1Q8TBB1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
LNX1Q8TBB1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 C17orf82-201ENST00000623772 1530 ntBASIC24.27■■□□□ 1.48
LNX1Q8TBB1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 AF213884.3-201ENST00000563833 479 ntBASIC24.27■■□□□ 1.48
LNX1Q8TBB1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
LNX1Q8TBB1 DUSP8P3-201ENST00000399571 1760 ntBASIC24.26■■□□□ 1.47
LNX1Q8TBB1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LNX1Q8TBB1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LNX1Q8TBB1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LNX1Q8TBB1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
LNX1Q8TBB1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms