Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.56■□□□□ 0.72
DNAAF1Q8NEP3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DNAAF1Q8NEP3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
DNAAF1Q8NEP3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 AL024507.2-201ENST00000606070 2574 ntBASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 KRT18P24-201ENST00000344739 1156 ntBASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNAAF1Q8NEP3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 TSPY13P-201ENST00000338964 914 ntBASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 AC120024.1-201ENST00000562672 995 ntBASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 AC007375.3-201ENST00000600936 2314 ntBASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DNAAF1Q8NEP3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNAAF1Q8NEP3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.52■□□□□ 0.71
DNAAF1Q8NEP3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.52■□□□□ 0.71
DNAAF1Q8NEP3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.52■□□□□ 0.71
DNAAF1Q8NEP3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DNAAF1Q8NEP3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNAAF1Q8NEP3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 THA1P-201ENST00000590384 1145 ntBASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNAAF1Q8NEP3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.49■□□□□ 0.71
DNAAF1Q8NEP3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms