Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC239859.2-201ENST00000444165 318 ntBASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 AC005703.6-201ENST00000623265 1329 ntBASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF439Q8NDP4 C9orf163-202ENST00000624034 2573 ntBASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF439Q8NDP4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF439Q8NDP4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.39■□□□□ 0.54
ZNF439Q8NDP4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ZNF439Q8NDP4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.39■□□□□ 0.54
ZNF439Q8NDP4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.39■□□□□ 0.54
ZNF439Q8NDP4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.39■□□□□ 0.54
ZNF439Q8NDP4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF439Q8NDP4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 MTDHP2-201ENST00000601468 714 ntBASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF439Q8NDP4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF439Q8NDP4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF439Q8NDP4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF439Q8NDP4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms