Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 GUSBP5-201ENST00000418136 578 ntBASIC21.79■■□□□ 1.08
CPSF7Q8N684 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF7Q8N684 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.79■■□□□ 1.08
CPSF7Q8N684 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF7Q8N684 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPSF7Q8N684 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPSF7Q8N684 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CPSF7Q8N684 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPSF7Q8N684 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF7Q8N684 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF7Q8N684 AC022616.5-201ENST00000518796 181 ntBASIC21.77■■□□□ 1.08
CPSF7Q8N684 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF7Q8N684 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPSF7Q8N684 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CPSF7Q8N684 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF7Q8N684 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.76■■□□□ 1.07
CPSF7Q8N684 AC239859.2-201ENST00000444165 318 ntBASIC21.76■■□□□ 1.07
CPSF7Q8N684 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.76■■□□□ 1.07
CPSF7Q8N684 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF7Q8N684 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF7Q8N684 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPSF7Q8N684 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPSF7Q8N684 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CPSF7Q8N684 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPSF7Q8N684 AC131274.2-201ENST00000580697 1507 ntBASIC21.75■■□□□ 1.07
CPSF7Q8N684 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF7Q8N684 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.75■■□□□ 1.07
CPSF7Q8N684 AC007375.3-201ENST00000600936 2314 ntBASIC21.75■■□□□ 1.07
CPSF7Q8N684 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF7Q8N684 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF7Q8N684 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.75■■□□□ 1.07
CPSF7Q8N684 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPSF7Q8N684 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.74■■□□□ 1.07
CPSF7Q8N684 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.74■■□□□ 1.07
CPSF7Q8N684 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
CPSF7Q8N684 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.74■■□□□ 1.07
CPSF7Q8N684 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPSF7Q8N684 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CPSF7Q8N684 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.73■■□□□ 1.07
CPSF7Q8N684 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPSF7Q8N684 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF7Q8N684 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF7Q8N684 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF7Q8N684 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF7Q8N684 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPSF7Q8N684 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.72■■□□□ 1.07
CPSF7Q8N684 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.71■■□□□ 1.07
CPSF7Q8N684 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPSF7Q8N684 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.07
CPSF7Q8N684 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF7Q8N684 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms