Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 U85056.1-201ENST00000616429 682 ntBASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LINC01561Q8N1V8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LINC01561Q8N1V8 AL353803.4-201ENST00000565882 1934 ntBASIC14.96□□□□□ -0.02
LINC01561Q8N1V8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01561Q8N1V8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 MIR4281-201ENST00000580852 62 ntBASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 THA1P-201ENST00000590384 1145 ntBASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01561Q8N1V8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 AC144652.1-201ENST00000609974 1624 ntBASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 KRT18P60-201ENST00000312876 1297 ntBASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01561Q8N1V8 SLC25A24-204ENST00000569674 2357 ntBASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 AC139530.1-201ENST00000575312 1977 ntBASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01561Q8N1V8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 C11orf96-202ENST00000528572 1834 ntBASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01561Q8N1V8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01561Q8N1V8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms