Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 AF213884.3-201ENST00000563833 479 ntBASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 AC136469.2-201ENST00000623944 1028 ntBASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM48Q8IWZ4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 AL031432.3-201ENST00000607698 485 ntBASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM48Q8IWZ4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 FP325331.1-202ENST00000623531 1380 ntBASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 AC144652.1-201ENST00000609974 1624 ntBASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM48Q8IWZ4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 SUDS3P1-201ENST00000505831 966 ntBASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 AP001330.3-201ENST00000520123 633 ntBASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TRIM48Q8IWZ4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM48Q8IWZ4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM48Q8IWZ4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
TRIM48Q8IWZ4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 AC027682.1-201ENST00000562846 899 ntBASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 AC008764.7-201ENST00000593779 1081 ntBASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 LINC01529-204ENST00000636474 1715 ntBASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM48Q8IWZ4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 MIR939-201ENST00000401314 82 ntBASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 AC091305.1-201ENST00000479476 895 ntBASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TRIM48Q8IWZ4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM48Q8IWZ4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms