Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
UBR1Q8IWV7 AC105233.4-201ENST00000642045 216 ntBASIC32.4■■■□□ 2.78
UBR1Q8IWV7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.39■■■□□ 2.78
UBR1Q8IWV7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
UBR1Q8IWV7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
UBR1Q8IWV7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
UBR1Q8IWV7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
UBR1Q8IWV7 MAP2K4P1-201ENST00000438453 1195 ntBASIC32.39■■■□□ 2.78
UBR1Q8IWV7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
UBR1Q8IWV7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
UBR1Q8IWV7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC32.38■■■□□ 2.77
UBR1Q8IWV7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
UBR1Q8IWV7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC32.37■■■□□ 2.77
UBR1Q8IWV7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
UBR1Q8IWV7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC32.37■■■□□ 2.77
UBR1Q8IWV7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
UBR1Q8IWV7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC32.37■■■□□ 2.77
UBR1Q8IWV7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC32.36■■■□□ 2.77
UBR1Q8IWV7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
UBR1Q8IWV7 AP004607.4-201ENST00000530158 1459 ntBASIC32.35■■■□□ 2.77
UBR1Q8IWV7 AC004854.2-201ENST00000608450 1441 ntBASIC32.35■■■□□ 2.77
UBR1Q8IWV7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
UBR1Q8IWV7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC32.34■■■□□ 2.77
UBR1Q8IWV7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 BID-214ENST00000617586 542 ntTSL 5 BASIC32.34■■■□□ 2.77
UBR1Q8IWV7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC32.33■■■□□ 2.77
UBR1Q8IWV7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
UBR1Q8IWV7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
UBR1Q8IWV7 HLA-L-211ENST00000482052 1765 ntBASIC32.33■■■□□ 2.77
UBR1Q8IWV7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
UBR1Q8IWV7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC32.33■■■□□ 2.77
UBR1Q8IWV7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 DUSP8P4-201ENST00000399538 1761 ntBASIC32.32■■■□□ 2.76
UBR1Q8IWV7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 AL109923.1-201ENST00000618799 583 ntBASIC32.32■■■□□ 2.76
UBR1Q8IWV7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
UBR1Q8IWV7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
UBR1Q8IWV7 NCF1B-203ENST00000435988 1254 ntBASIC32.31■■■□□ 2.76
UBR1Q8IWV7 AC006970.2-201ENST00000450065 779 ntBASIC32.31■■■□□ 2.76
UBR1Q8IWV7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
UBR1Q8IWV7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
UBR1Q8IWV7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC32.29■■■□□ 2.76
UBR1Q8IWV7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC32.29■■■□□ 2.76
UBR1Q8IWV7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
UBR1Q8IWV7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.29■■■□□ 2.76
UBR1Q8IWV7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
UBR1Q8IWV7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC32.28■■■□□ 2.76
UBR1Q8IWV7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 COX20-201ENST00000366528 568 ntTSL 2 BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
UBR1Q8IWV7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
UBR1Q8IWV7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC32.26■■■□□ 2.76
UBR1Q8IWV7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
UBR1Q8IWV7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC32.26■■■□□ 2.76
UBR1Q8IWV7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC32.26■■■□□ 2.75
UBR1Q8IWV7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
UBR1Q8IWV7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC32.26■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms