Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCDC60Q8IWA6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.95■■□□□ 1.59
CCDC60Q8IWA6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.95■■□□□ 1.59
CCDC60Q8IWA6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CCDC60Q8IWA6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 SLC47A1P1-202ENST00000449666 945 ntBASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
CCDC60Q8IWA6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
CCDC60Q8IWA6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC60Q8IWA6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.93■■□□□ 1.58
CCDC60Q8IWA6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CCDC60Q8IWA6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC60Q8IWA6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CCDC60Q8IWA6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CCDC60Q8IWA6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CCDC60Q8IWA6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CCDC60Q8IWA6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC60Q8IWA6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC60Q8IWA6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CCDC60Q8IWA6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.89■■□□□ 1.58
CCDC60Q8IWA6 AC010525.1-201ENST00000585559 441 ntBASIC24.89■■□□□ 1.58
CCDC60Q8IWA6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
CCDC60Q8IWA6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CCDC60Q8IWA6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
CCDC60Q8IWA6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CCDC60Q8IWA6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 AL353803.4-201ENST00000565882 1934 ntBASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCDC60Q8IWA6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCDC60Q8IWA6 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.87■■□□□ 1.57
CCDC60Q8IWA6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CCDC60Q8IWA6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.87■■□□□ 1.57
CCDC60Q8IWA6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 OR2I1P-207ENST00000453522 948 ntBASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 AC126544.1-201ENST00000580842 1059 ntBASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCDC60Q8IWA6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCDC60Q8IWA6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms