Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.93■■□□□ 1.1
APLFQ8IW19 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.93■■□□□ 1.1
APLFQ8IW19 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.93■■□□□ 1.1
APLFQ8IW19 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
APLFQ8IW19 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
APLFQ8IW19 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
APLFQ8IW19 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APLFQ8IW19 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
APLFQ8IW19 ECEL1P1-201ENST00000373592 1742 ntBASIC21.92■■□□□ 1.1
APLFQ8IW19 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.92■■□□□ 1.1
APLFQ8IW19 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APLFQ8IW19 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APLFQ8IW19 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
APLFQ8IW19 PKD1P6-201ENST00000343738 4769 ntBASIC21.92■■□□□ 1.1
APLFQ8IW19 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.91■■□□□ 1.1
APLFQ8IW19 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.91■■□□□ 1.1
APLFQ8IW19 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
APLFQ8IW19 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.91■■□□□ 1.1
APLFQ8IW19 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.91■■□□□ 1.1
APLFQ8IW19 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.91■■□□□ 1.1
APLFQ8IW19 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.91■■□□□ 1.1
APLFQ8IW19 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
APLFQ8IW19 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.91■■□□□ 1.1
APLFQ8IW19 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.9■■□□□ 1.1
APLFQ8IW19 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
APLFQ8IW19 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
APLFQ8IW19 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
APLFQ8IW19 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.9■■□□□ 1.1
APLFQ8IW19 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 AC110285.6-201ENST00000617652 491 ntBASIC21.9■■□□□ 1.1
APLFQ8IW19 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.9■■□□□ 1.1
APLFQ8IW19 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
APLFQ8IW19 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APLFQ8IW19 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
APLFQ8IW19 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APLFQ8IW19 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.89■■□□□ 1.09
APLFQ8IW19 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
APLFQ8IW19 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
APLFQ8IW19 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APLFQ8IW19 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APLFQ8IW19 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.88■■□□□ 1.09
APLFQ8IW19 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
APLFQ8IW19 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
APLFQ8IW19 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.87■■□□□ 1.09
APLFQ8IW19 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.87■■□□□ 1.09
APLFQ8IW19 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APLFQ8IW19 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
APLFQ8IW19 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
APLFQ8IW19 AC133561.4-201ENST00000566112 224 ntBASIC21.87■■□□□ 1.09
APLFQ8IW19 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.87■■□□□ 1.09
APLFQ8IW19 MIR4466-201ENST00000606121 54 ntBASIC21.87■■□□□ 1.09
APLFQ8IW19 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
APLFQ8IW19 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
APLFQ8IW19 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.86■■□□□ 1.09
APLFQ8IW19 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.86■■□□□ 1.09
APLFQ8IW19 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.86■■□□□ 1.09
APLFQ8IW19 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.86■■□□□ 1.09
APLFQ8IW19 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
APLFQ8IW19 AC004812.2-201ENST00000611079 2094 ntBASIC21.86■■□□□ 1.09
APLFQ8IW19 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.86■■□□□ 1.09
APLFQ8IW19 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
APLFQ8IW19 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 AC092667.1-201ENST00000434301 2586 ntBASIC21.85■■□□□ 1.09
APLFQ8IW19 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.85■■□□□ 1.09
APLFQ8IW19 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.85■■□□□ 1.09
APLFQ8IW19 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
APLFQ8IW19 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
APLFQ8IW19 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.85■■□□□ 1.09
APLFQ8IW19 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
APLFQ8IW19 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
APLFQ8IW19 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms