Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 AC004854.2-201ENST00000608450 1441 ntBASIC34.64■■■■□ 3.14
ABCA9Q8IUA7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC34.64■■■■□ 3.14
ABCA9Q8IUA7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
ABCA9Q8IUA7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
ABCA9Q8IUA7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC34.64■■■■□ 3.14
ABCA9Q8IUA7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC34.63■■■■□ 3.13
ABCA9Q8IUA7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
ABCA9Q8IUA7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
ABCA9Q8IUA7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
ABCA9Q8IUA7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC34.61■■■■□ 3.13
ABCA9Q8IUA7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
ABCA9Q8IUA7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
ABCA9Q8IUA7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
ABCA9Q8IUA7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
ABCA9Q8IUA7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
ABCA9Q8IUA7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC34.57■■■■□ 3.13
ABCA9Q8IUA7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.13
ABCA9Q8IUA7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC34.57■■■■□ 3.12
ABCA9Q8IUA7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 COX20-201ENST00000366528 568 ntTSL 2 BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
ABCA9Q8IUA7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 AC066615.1-201ENST00000640911 628 ntBASIC34.55■■■■□ 3.12
ABCA9Q8IUA7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 TMEM191A-211ENST00000637163 1067 ntBASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
ABCA9Q8IUA7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 AC142086.2-201ENST00000569753 217 ntBASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCA9Q8IUA7 DUX4L4-201ENST00000566884 1269 ntBASIC34.52■■■■□ 3.12
ABCA9Q8IUA7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC34.52■■■■□ 3.12
ABCA9Q8IUA7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
ABCA9Q8IUA7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
ABCA9Q8IUA7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
ABCA9Q8IUA7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.12
ABCA9Q8IUA7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC34.51■■■■□ 3.12
ABCA9Q8IUA7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
ABCA9Q8IUA7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.5■■■■□ 3.11
ABCA9Q8IUA7 HLA-L-211ENST00000482052 1765 ntBASIC34.5■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms