Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 ABCB10P4-201ENST00000566803 2184 ntBASIC24.97■■□□□ 1.59
TRIM50Q86XT4 AC144652.1-201ENST00000609974 1624 ntBASIC24.97■■□□□ 1.59
TRIM50Q86XT4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TRIM50Q86XT4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 DUX4L4-201ENST00000566884 1269 ntBASIC24.96■■□□□ 1.59
TRIM50Q86XT4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.96■■□□□ 1.59
TRIM50Q86XT4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
TRIM50Q86XT4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
TRIM50Q86XT4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
TRIM50Q86XT4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TRIM50Q86XT4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TRIM50Q86XT4 FP325331.1-202ENST00000623531 1380 ntBASIC24.93■■□□□ 1.58
TRIM50Q86XT4 LINC01529-204ENST00000636474 1715 ntBASIC24.93■■□□□ 1.58
TRIM50Q86XT4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TRIM50Q86XT4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
TRIM50Q86XT4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM50Q86XT4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 AL162430.1-201ENST00000480705 870 ntBASIC24.9■■□□□ 1.58
TRIM50Q86XT4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TRIM50Q86XT4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 IGHV3-19-201ENST00000521488 291 ntBASIC24.89■■□□□ 1.58
TRIM50Q86XT4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 AC104564.3-201ENST00000582367 638 ntBASIC24.89■■□□□ 1.58
TRIM50Q86XT4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.89■■□□□ 1.58
TRIM50Q86XT4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
TRIM50Q86XT4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.88■■□□□ 1.57
TRIM50Q86XT4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
TRIM50Q86XT4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM50Q86XT4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms