Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAI1Q7Z5J4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 AC123595.1-201ENST00000440769 1046 ntBASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 RARRES2P11-201ENST00000635158 484 ntBASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAI1Q7Z5J4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAI1Q7Z5J4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 KRT18P14-201ENST00000534205 1250 ntBASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 AC004812.2-201ENST00000611079 2094 ntBASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 AC022517.1-201ENST00000592429 346 ntBASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 AL499627.2-201ENST00000606283 725 ntBASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAI1Q7Z5J4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAI1Q7Z5J4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RAI1Q7Z5J4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 AL354811.1-201ENST00000610286 706 ntBASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 AC133637.1-201ENST00000624115 1537 ntBASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAI1Q7Z5J4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 OR2I1P-207ENST00000453522 948 ntBASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAI1Q7Z5J4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAI1Q7Z5J4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms