Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
TMEM53Q6P2H8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 AC141586.4-201ENST00000624558 1573 ntBASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TMEM53Q6P2H8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TMEM53Q6P2H8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 BX664725.1-201ENST00000438252 379 ntBASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMEM53Q6P2H8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 AC137630.3-201ENST00000607245 391 ntBASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM53Q6P2H8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM53Q6P2H8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 AL161729.1-201ENST00000604104 1402 ntBASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 AF131216.4-201ENST00000638924 1588 ntBASIC20.17■□□□□ 0.82
TMEM53Q6P2H8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 AL022069.1-201ENST00000568025 1636 ntBASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 KRT125P-201ENST00000546827 989 ntBASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 AL451085.2-201ENST00000605085 799 ntBASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM53Q6P2H8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.15■□□□□ 0.82
TMEM53Q6P2H8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms