Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDPF1Q6NVV7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
CDPF1Q6NVV7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDPF1Q6NVV7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CDPF1Q6NVV7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 RARRES2P2-201ENST00000394842 485 ntBASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 AC008813.1-201ENST00000536597 885 ntBASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 LINC01521-201ENST00000504184 1943 ntBASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDPF1Q6NVV7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDPF1Q6NVV7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 ABHD17AP5-201ENST00000580133 923 ntBASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDPF1Q6NVV7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 LETM1P2-201ENST00000597330 2178 ntBASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 RNF126P1-201ENST00000567452 1320 ntBASIC16.86■□□□□ 0.29
CDPF1Q6NVV7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 C11orf96-202ENST00000528572 1834 ntBASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 GPX1-201ENST00000419349 1106 ntBASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDPF1Q6NVV7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms