Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39BQ5VTQ0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39BQ5VTQ0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC39BQ5VTQ0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC39BQ5VTQ0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 AC079834.2-201ENST00000609776 1949 ntBASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39BQ5VTQ0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 C9orf163-202ENST00000624034 2573 ntBASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 AL139246.5-201ENST00000606645 996 ntBASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39BQ5VTQ0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 AC096631.2-201ENST00000436136 790 ntBASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39BQ5VTQ0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 AC099791.2-201ENST00000605725 427 ntBASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39BQ5VTQ0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39BQ5VTQ0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
TTC39BQ5VTQ0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC39BQ5VTQ0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39BQ5VTQ0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
TTC39BQ5VTQ0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39BQ5VTQ0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39BQ5VTQ0 AC110285.6-201ENST00000617652 491 ntBASIC23.14■■□□□ 1.29
TTC39BQ5VTQ0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.14■■□□□ 1.29
TTC39BQ5VTQ0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TTC39BQ5VTQ0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 SYT6-210ENST00000641643 1587 ntBASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC39BQ5VTQ0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 AL138724.1-201ENST00000606771 1088 ntBASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 AC009086.3-201ENST00000623486 1008 ntBASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.12■■□□□ 1.29
TTC39BQ5VTQ0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TTC39BQ5VTQ0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms