Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.3■■□□□ 1.8
CERKLQ49MI3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
CERKLQ49MI3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.29■■□□□ 1.8
CERKLQ49MI3 AC010525.1-201ENST00000585559 441 ntBASIC26.29■■□□□ 1.8
CERKLQ49MI3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.29■■□□□ 1.8
CERKLQ49MI3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.29■■□□□ 1.8
CERKLQ49MI3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CERKLQ49MI3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CERKLQ49MI3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.28■■□□□ 1.8
CERKLQ49MI3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.28■■□□□ 1.8
CERKLQ49MI3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CERKLQ49MI3 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.28■■□□□ 1.8
CERKLQ49MI3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CERKLQ49MI3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
CERKLQ49MI3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CERKLQ49MI3 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.27■■□□□ 1.8
CERKLQ49MI3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CERKLQ49MI3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CERKLQ49MI3 IGHV3-19-201ENST00000521488 291 ntBASIC26.27■■□□□ 1.8
CERKLQ49MI3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CERKLQ49MI3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CERKLQ49MI3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.27■■□□□ 1.8
CERKLQ49MI3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CERKLQ49MI3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CERKLQ49MI3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CERKLQ49MI3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CERKLQ49MI3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CERKLQ49MI3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CERKLQ49MI3 OR2I1P-207ENST00000453522 948 ntBASIC26.26■■□□□ 1.79
CERKLQ49MI3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CERKLQ49MI3 AC104564.3-201ENST00000582367 638 ntBASIC26.26■■□□□ 1.79
CERKLQ49MI3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CERKLQ49MI3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.26■■□□□ 1.79
CERKLQ49MI3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CERKLQ49MI3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.24■■□□□ 1.79
CERKLQ49MI3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.24■■□□□ 1.79
CERKLQ49MI3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.24■■□□□ 1.79
CERKLQ49MI3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CERKLQ49MI3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
CERKLQ49MI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CERKLQ49MI3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CERKLQ49MI3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CERKLQ49MI3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CERKLQ49MI3 AL162430.1-201ENST00000480705 870 ntBASIC26.22■■□□□ 1.79
CERKLQ49MI3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.22■■□□□ 1.79
CERKLQ49MI3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CERKLQ49MI3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CERKLQ49MI3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.21■■□□□ 1.79
CERKLQ49MI3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CERKLQ49MI3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CERKLQ49MI3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.2■■□□□ 1.78
CERKLQ49MI3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CERKLQ49MI3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms