Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ZSCAN25-206ENST00000466948 644 ntTSL 314.86□□□□□ -0.039e-7■■■■□ 20.4
SRSF1Q07955 ATIC-208ENST00000444305 569 ntTSL 414.57□□□□□ -0.089e-7■■■■□ 20.4
SRSF1Q07955 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.57□□□□□ -0.089e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.82□□□□□ -0.29e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-210ENST00000493443 558 ntTSL 413.61□□□□□ -0.239e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-207ENST00000473646 584 ntTSL 413.11□□□□□ -0.319e-7■■■■□ 20.4
SRSF1Q07955 ATIC-214ENST00000488712 744 ntTSL 310.56□□□□□ -0.729e-7■■■■□ 20.4
SRSF1Q07955 ASXL1-207ENST00000553345 809 ntTSL 510.46□□□□□ -0.739e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-208ENST00000481424 5722 ntTSL 1 (best)10.27□□□□□ -0.769e-7■■■■□ 20.4
SRSF1Q07955 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.839e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-209ENST00000485586 4885 ntTSL 29.08□□□□□ -0.969e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-203ENST00000394150 2823 ntTSL 28.4□□□□□ -1.069e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.159e-7■■■■□ 20.4
SRSF1Q07955 ATIC-202ENST00000413174 695 ntTSL 57.8□□□□□ -1.169e-7■■■■□ 20.4
SRSF1Q07955 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.189e-7■■■■□ 20.4
SRSF1Q07955 SRSF11-208ENST00000463859 1035 ntTSL 54.99□□□□□ -1.612e-8■■■■□ 20.4
SRSF1Q07955 MAP4K4-208ENST00000418101 776 ntTSL 39.43□□□□□ -0.92e-9■■■■□ 20.4
SRSF1Q07955 MAP4K4-213ENST00000476609 3598 ntTSL 27.6□□□□□ -1.192e-9■■■■□ 20.4
SRSF1Q07955 STK36-216ENST00000492486 592 ntTSL 312.2□□□□□ -0.467e-7■■■■□ 20.4
SRSF1Q07955 ANKZF1-214ENST00000467884 1090 ntTSL 512.52□□□□□ -0.413e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-226ENST00000496346 1290 ntTSL 211.96□□□□□ -0.493e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-210ENST00000461731 1566 ntTSL 211.9□□□□□ -0.53e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-216ENST00000474225 900 ntTSL 311.6□□□□□ -0.553e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-222ENST00000490526 516 ntTSL 211.1□□□□□ -0.633e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.04□□□□□ -0.643e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-211ENST00000463792 3245 ntTSL 211.01□□□□□ -0.653e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-218ENST00000477479 2940 ntTSL 1 (best)10.99□□□□□ -0.653e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.713e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.713e-6■■■■□ 20.4
SRSF1Q07955 ANKZF1-213ENST00000465550 2793 ntTSL 29.5□□□□□ -0.893e-6■■■■□ 20.4
SRSF1Q07955 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC11.52□□□□□ -0.576e-6■■■■□ 20.3
SRSF1Q07955 ZNF726-202ENST00000334589 847 ntTSL 3 BASIC9.38□□□□□ -0.916e-6■■■■□ 20.3
SRSF1Q07955 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.24□□□□□ -1.096e-6■■■■□ 20.3
SRSF1Q07955 ZNF726-201ENST00000322487 2330 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.26e-6■■■■□ 20.3
SRSF1Q07955 ZNF726-206ENST00000594466 2473 ntTSL 5 BASIC7.21□□□□□ -1.256e-6■■■■□ 20.3
SRSF1Q07955 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.54□□□□□ -1.686e-6■■■■□ 20.3
SRSF1Q07955 OAZ1-203ENST00000586054 2832 nt16.65■□□□□ 0.262e-13■■■■□ 20.3
SRSF1Q07955 CHPT1-210ENST00000552351 1524 ntTSL 224.42■■□□□ 1.51e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.351e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-204ENST00000549128 1552 ntTSL 523.48■■□□□ 1.351e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.091e-6■■■■□ 20.3
SRSF1Q07955 RECQL4-206ENST00000534270 517 ntTSL 320.71■□□□□ 0.911e-6■■■■□ 20.3
SRSF1Q07955 CDK6-205ENST00000491250 558 ntTSL 419.96■□□□□ 0.791e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-202ENST00000546490 476 ntTSL 218.09■□□□□ 0.491e-6■■■■□ 20.3
SRSF1Q07955 MAD1L1-221ENST00000486340 646 ntTSL 316.47■□□□□ 0.231e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF40-204ENST00000555038 1796 ntTSL 1 (best)16.14■□□□□ 0.171e-6■■■■□ 20.3
SRSF1Q07955 KIAA2026-205ENST00000513355 1967 ntTSL 515.53■□□□□ 0.081e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-221ENST00000589538 559 ntTSL 515.12■□□□□ 0.011e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-229ENST00000593049 534 ntTSL 415.12■□□□□ 0.011e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-217ENST00000589091 563 ntTSL 314□□□□□ -0.171e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-213ENST00000587604 513 ntTSL 213.97□□□□□ -0.171e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.211e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-207ENST00000555223 773 ntTSL 513.5□□□□□ -0.255e-7■■■■□ 20.3
SRSF1Q07955 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.281e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.325e-7■■■■□ 20.3
SRSF1Q07955 LIG1-208ENST00000595758 606 ntTSL 412.99□□□□□ -0.331e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF40-202ENST00000553709 5204 ntTSL 1 (best)12.56□□□□□ -0.41e-6■■■■□ 20.3
SRSF1Q07955 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.34□□□□□ -0.431e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF40-207ENST00000556399 4902 ntTSL 1 (best)12.1□□□□□ -0.471e-6■■■■□ 20.3
SRSF1Q07955 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.521e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-210ENST00000556124 1546 ntTSL 511.3□□□□□ -0.61e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-206ENST00000554915 586 ntTSL 211.07□□□□□ -0.641e-6■■■■□ 20.3
SRSF1Q07955 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.663e-6■■■■□ 20.3
SRSF1Q07955 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.663e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-207ENST00000586588 3094 ntTSL 210.53□□□□□ -0.721e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC10.53□□□□□ -0.721e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.731e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF10L-201ENST00000167825 3018 ntTSL 210.41□□□□□ -0.741e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-228ENST00000592705 5215 ntTSL 1 (best)10.35□□□□□ -0.751e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF10L-206ENST00000469726 4585 ntTSL 210.34□□□□□ -0.751e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC10.1□□□□□ -0.791e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-204ENST00000554249 987 ntTSL 210.07□□□□□ -0.81e-6■■■■□ 20.3
SRSF1Q07955 LIG1-209ENST00000596104 531 ntTSL 310.04□□□□□ -0.81e-6■■■■□ 20.3
SRSF1Q07955 LIG1-207ENST00000594759 4102 ntTSL 1 (best)9.92□□□□□ -0.823e-6■■■■□ 20.3
SRSF1Q07955 LRP5L-205ENST00000468442 600 ntTSL 39.79□□□□□ -0.841e-6■■■■□ 20.3
SRSF1Q07955 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.863e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC9.57□□□□□ -0.881e-6■■■■□ 20.3
SRSF1Q07955 MAD1L1-214ENST00000459731 371 ntTSL 39.44□□□□□ -0.91e-6■■■■□ 20.3
SRSF1Q07955 ARHGEF40-206ENST00000555232 3902 ntTSL 29.38□□□□□ -0.911e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-206ENST00000550385 754 ntTSL 59.08□□□□□ -0.961e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-209ENST00000555785 464 ntTSL 39□□□□□ -0.971e-6■■■■□ 20.3
SRSF1Q07955 LIG1-220ENST00000601091 3957 ntTSL 58.87□□□□□ -0.993e-6■■■■□ 20.3
SRSF1Q07955 CHPT1-208ENST00000552215 4342 ntTSL 1 (best)6.72□□□□□ -1.331e-6■■■■□ 20.3
SRSF1Q07955 WDR26-203ENST00000445239 784 ntTSL 56.21□□□□□ -1.421e-6■■■■□ 20.3
SRSF1Q07955 OSGEP-208ENST00000555656 3258 ntTSL 25.95□□□□□ -1.461e-6■■■■□ 20.3
SRSF1Q07955 DNMT1-220ENST00000589351 672 ntTSL 25.56□□□□□ -1.521e-6■■■■□ 20.3
SRSF1Q07955 LYL1-203ENST00000590974 902 ntTSL 320.76■□□□□ 0.912e-15■■■■□ 20.3
SRSF1Q07955 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.892e-15■■■■□ 20.3
SRSF1Q07955 LYL1-202ENST00000590120 1547 nt17.72■□□□□ 0.432e-15■■■■□ 20.3
SRSF1Q07955 CASC3-207ENST00000581849 580 ntTSL 221.31■■□□□ 14e-6■■■■□ 20.2
SRSF1Q07955 PCNP-207ENST00000498274 786 ntTSL 218.27■□□□□ 0.524e-6■■■■□ 20.2
SRSF1Q07955 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.62■□□□□ 0.414e-6■■■■□ 20.2
SRSF1Q07955 CASC3-203ENST00000418132 1986 ntTSL 1 (best)17.37■□□□□ 0.374e-6■■■■□ 20.2
SRSF1Q07955 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.274e-6■■■■□ 20.2
SRSF1Q07955 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.24e-6■■■■□ 20.2
SRSF1Q07955 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.34e-6■■■■□ 20.2
SRSF1Q07955 SEC31A-236ENST00000513323 822 ntTSL 312.93□□□□□ -0.344e-6■■■■□ 20.2
SRSF1Q07955 ZKSCAN1-204ENST00000482979 1449 ntTSL 1 (best)12.6□□□□□ -0.394e-6■■■■□ 20.2
SRSF1Q07955 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.37□□□□□ -0.434e-6■■■■□ 20.2
SRSF1Q07955 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.444e-6■■■■□ 20.2
Retrieved 100 of 14,836 protein–RNA pairs in 248 ms