Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.37■□□□□ 0.69
SEC61A1P61619 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.37■□□□□ 0.69
SEC61A1P61619 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SEC61A1P61619 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.37■□□□□ 0.69
SEC61A1P61619 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEC61A1P61619 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
SEC61A1P61619 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SEC61A1P61619 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SEC61A1P61619 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.36■□□□□ 0.69
SEC61A1P61619 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 PKD1P6-201ENST00000343738 4769 ntBASIC19.36■□□□□ 0.69
SEC61A1P61619 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEC61A1P61619 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SEC61A1P61619 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A1P61619 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A1P61619 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.35■□□□□ 0.69
SEC61A1P61619 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.35■□□□□ 0.69
SEC61A1P61619 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.35■□□□□ 0.69
SEC61A1P61619 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
SEC61A1P61619 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEC61A1P61619 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEC61A1P61619 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.35■□□□□ 0.69
SEC61A1P61619 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.35■□□□□ 0.69
SEC61A1P61619 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SEC61A1P61619 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SEC61A1P61619 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.34■□□□□ 0.69
SEC61A1P61619 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SEC61A1P61619 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SEC61A1P61619 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.34■□□□□ 0.69
SEC61A1P61619 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SEC61A1P61619 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.34■□□□□ 0.69
SEC61A1P61619 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SEC61A1P61619 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SEC61A1P61619 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SEC61A1P61619 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A1P61619 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.33■□□□□ 0.69
SEC61A1P61619 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A1P61619 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A1P61619 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A1P61619 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SEC61A1P61619 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.33■□□□□ 0.69
SEC61A1P61619 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SEC61A1P61619 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.33■□□□□ 0.68
SEC61A1P61619 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.33■□□□□ 0.68
SEC61A1P61619 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.33■□□□□ 0.68
SEC61A1P61619 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.32■□□□□ 0.68
SEC61A1P61619 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SEC61A1P61619 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A1P61619 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A1P61619 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A1P61619 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.32■□□□□ 0.68
SEC61A1P61619 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SEC61A1P61619 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.32■□□□□ 0.68
SEC61A1P61619 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SEC61A1P61619 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SEC61A1P61619 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.31■□□□□ 0.68
SEC61A1P61619 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SEC61A1P61619 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.31■□□□□ 0.68
SEC61A1P61619 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.31■□□□□ 0.68
SEC61A1P61619 MTDHP2-201ENST00000601468 714 ntBASIC19.31■□□□□ 0.68
SEC61A1P61619 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.31■□□□□ 0.68
SEC61A1P61619 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
SEC61A1P61619 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SEC61A1P61619 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.31■□□□□ 0.68
SEC61A1P61619 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SEC61A1P61619 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SEC61A1P61619 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms