Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZC3H6P61129 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZC3H6P61129 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.23■■■□□ 2.43
ZC3H6P61129 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ZC3H6P61129 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ZC3H6P61129 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.22■■■□□ 2.43
ZC3H6P61129 RAP2CP1-201ENST00000605103 478 ntBASIC30.22■■■□□ 2.43
ZC3H6P61129 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.22■■■□□ 2.43
ZC3H6P61129 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ZC3H6P61129 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.21■■■□□ 2.43
ZC3H6P61129 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.21■■■□□ 2.43
ZC3H6P61129 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ZC3H6P61129 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
ZC3H6P61129 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ZC3H6P61129 AC006015.1-201ENST00000429970 570 ntBASIC30.21■■■□□ 2.43
ZC3H6P61129 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.21■■■□□ 2.43
ZC3H6P61129 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.2■■■□□ 2.43
ZC3H6P61129 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ZC3H6P61129 AC135731.1-201ENST00000569415 2548 ntBASIC30.2■■■□□ 2.43
ZC3H6P61129 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ZC3H6P61129 AP005435.1-201ENST00000529293 1178 ntBASIC30.2■■■□□ 2.43
ZC3H6P61129 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.2■■■□□ 2.43
ZC3H6P61129 TMEM202-AS1-202ENST00000565181 2325 ntBASIC30.2■■■□□ 2.43
ZC3H6P61129 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.2■■■□□ 2.42
ZC3H6P61129 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
ZC3H6P61129 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H6P61129 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC30.19■■■□□ 2.42
ZC3H6P61129 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.19■■■□□ 2.42
ZC3H6P61129 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H6P61129 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H6P61129 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
ZC3H6P61129 CDCA4P2-201ENST00000441182 718 ntBASIC30.19■■■□□ 2.42
ZC3H6P61129 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ZC3H6P61129 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.19■■■□□ 2.42
ZC3H6P61129 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.18■■■□□ 2.42
ZC3H6P61129 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ZC3H6P61129 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
ZC3H6P61129 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.18■■■□□ 2.42
ZC3H6P61129 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.18■■■□□ 2.42
ZC3H6P61129 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ZC3H6P61129 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ZC3H6P61129 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.18■■■□□ 2.42
ZC3H6P61129 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ZC3H6P61129 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZC3H6P61129 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ZC3H6P61129 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.17■■■□□ 2.42
ZC3H6P61129 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZC3H6P61129 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZC3H6P61129 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.17■■■□□ 2.42
ZC3H6P61129 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC30.16■■■□□ 2.42
ZC3H6P61129 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZC3H6P61129 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.16■■■□□ 2.42
ZC3H6P61129 AC073111.5-205ENST00000641717 521 ntBASIC30.16■■■□□ 2.42
ZC3H6P61129 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZC3H6P61129 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
ZC3H6P61129 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
ZC3H6P61129 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.15■■■□□ 2.42
ZC3H6P61129 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.15■■■□□ 2.42
ZC3H6P61129 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
ZC3H6P61129 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.15■■■□□ 2.42
ZC3H6P61129 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.15■■■□□ 2.42
ZC3H6P61129 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.15■■■□□ 2.42
ZC3H6P61129 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.15■■■□□ 2.42
ZC3H6P61129 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ZC3H6P61129 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZC3H6P61129 AC145676.1-201ENST00000514988 2004 ntBASIC30.15■■■□□ 2.42
ZC3H6P61129 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ZC3H6P61129 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ZC3H6P61129 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.14■■■□□ 2.42
ZC3H6P61129 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ZC3H6P61129 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC30.14■■■□□ 2.42
ZC3H6P61129 AC137761.2-201ENST00000561729 223 ntBASIC30.14■■■□□ 2.42
ZC3H6P61129 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.14■■■□□ 2.42
ZC3H6P61129 AC145350.3-201ENST00000569033 163 ntBASIC30.14■■■□□ 2.42
ZC3H6P61129 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ZC3H6P61129 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ZC3H6P61129 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
ZC3H6P61129 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.14■■■□□ 2.41
ZC3H6P61129 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ZC3H6P61129 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.14■■■□□ 2.41
ZC3H6P61129 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
ZC3H6P61129 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ZC3H6P61129 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
ZC3H6P61129 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.13■■■□□ 2.41
ZC3H6P61129 AC016769.1-201ENST00000409132 1010 ntBASIC30.13■■■□□ 2.41
ZC3H6P61129 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.13■■■□□ 2.41
ZC3H6P61129 DUX4L4-201ENST00000566884 1269 ntBASIC30.13■■■□□ 2.41
ZC3H6P61129 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.13■■■□□ 2.41
ZC3H6P61129 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
ZC3H6P61129 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ZC3H6P61129 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
ZC3H6P61129 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZC3H6P61129 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC30.11■■■□□ 2.41
ZC3H6P61129 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms