Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2NP61088 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2NP61088 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
UBE2NP61088 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
UBE2NP61088 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2NP61088 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE2NP61088 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE2NP61088 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 LINC01529-204ENST00000636474 1715 ntBASIC19.56■□□□□ 0.72
UBE2NP61088 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UBE2NP61088 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE2NP61088 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UBE2NP61088 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 UNC93B3-201ENST00000308076 687 ntBASIC19.56■□□□□ 0.72
UBE2NP61088 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE2NP61088 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UBE2NP61088 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE2NP61088 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.55■□□□□ 0.72
UBE2NP61088 AL139246.5-201ENST00000606645 996 ntBASIC19.55■□□□□ 0.72
UBE2NP61088 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.55■□□□□ 0.72
UBE2NP61088 AC079630.1-202ENST00000618127 1840 ntBASIC19.55■□□□□ 0.72
UBE2NP61088 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBE2NP61088 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2NP61088 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2NP61088 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UBE2NP61088 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.54■□□□□ 0.72
UBE2NP61088 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.54■□□□□ 0.72
UBE2NP61088 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
UBE2NP61088 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.54■□□□□ 0.72
UBE2NP61088 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2NP61088 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UBE2NP61088 AL136162.1-201ENST00000607711 1078 ntBASIC19.54■□□□□ 0.72
UBE2NP61088 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UBE2NP61088 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2NP61088 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBE2NP61088 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UBE2NP61088 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBE2NP61088 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBE2NP61088 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.54■□□□□ 0.72
UBE2NP61088 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 AC006455.2-201ENST00000429931 906 ntBASIC19.53■□□□□ 0.72
UBE2NP61088 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 PBX2P1-201ENST00000493219 1291 ntBASIC19.53■□□□□ 0.72
UBE2NP61088 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.53■□□□□ 0.72
UBE2NP61088 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UBE2NP61088 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBE2NP61088 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBE2NP61088 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.72
UBE2NP61088 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE2NP61088 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBE2NP61088 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE2NP61088 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBE2NP61088 DUX4L4-201ENST00000566884 1269 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 AL138724.1-201ENST00000606771 1088 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 pRNA.6-201ENST00000610482 90 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 pRNA.5-201ENST00000612139 90 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 pRNA.11-201ENST00000618423 90 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 pRNA.13-201ENST00000619112 90 ntBASIC19.52■□□□□ 0.72
UBE2NP61088 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
UBE2NP61088 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBE2NP61088 AC135279.3-201ENST00000610945 1311 ntBASIC19.51■□□□□ 0.71
UBE2NP61088 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBE2NP61088 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2NP61088 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2NP61088 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2NP61088 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2NP61088 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBE2NP61088 SERBP1P1-201ENST00000396021 1160 ntBASIC19.51■□□□□ 0.71
UBE2NP61088 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.51■□□□□ 0.71
UBE2NP61088 AC110285.6-201ENST00000617652 491 ntBASIC19.51■□□□□ 0.71
UBE2NP61088 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.51■□□□□ 0.71
UBE2NP61088 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UBE2NP61088 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBE2NP61088 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2NP61088 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2NP61088 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2NP61088 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBE2NP61088 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.5■□□□□ 0.71
UBE2NP61088 ANOS2P-203ENST00000472227 1816 ntBASIC19.5■□□□□ 0.71
UBE2NP61088 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
UBE2NP61088 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms