Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS1BP61024 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CKS1BP61024 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.46■□□□□ 0.07
CKS1BP61024 AC093536.1-201ENST00000569153 554 ntBASIC15.46■□□□□ 0.07
CKS1BP61024 AC092296.2-201ENST00000589470 999 ntBASIC15.46■□□□□ 0.07
CKS1BP61024 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CKS1BP61024 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CKS1BP61024 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CKS1BP61024 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CKS1BP61024 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CKS1BP61024 FOXO3B-201ENST00000395675 1928 ntBASIC15.45■□□□□ 0.06
CKS1BP61024 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.45■□□□□ 0.06
CKS1BP61024 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CKS1BP61024 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CKS1BP61024 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CKS1BP61024 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CKS1BP61024 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CKS1BP61024 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.44■□□□□ 0.06
CKS1BP61024 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.44■□□□□ 0.06
CKS1BP61024 AC022413.1-201ENST00000624602 984 ntBASIC15.44■□□□□ 0.06
CKS1BP61024 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CKS1BP61024 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.44■□□□□ 0.06
CKS1BP61024 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.43■□□□□ 0.06
CKS1BP61024 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.43■□□□□ 0.06
CKS1BP61024 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.43■□□□□ 0.06
CKS1BP61024 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CKS1BP61024 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
CKS1BP61024 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CKS1BP61024 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.43■□□□□ 0.06
CKS1BP61024 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.43■□□□□ 0.06
CKS1BP61024 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CKS1BP61024 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CKS1BP61024 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CKS1BP61024 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.42■□□□□ 0.06
CKS1BP61024 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.42■□□□□ 0.06
CKS1BP61024 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CKS1BP61024 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.41■□□□□ 0.06
CKS1BP61024 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CKS1BP61024 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.41■□□□□ 0.06
CKS1BP61024 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.41■□□□□ 0.06
CKS1BP61024 AC007952.6-201ENST00000573168 2673 ntBASIC15.41■□□□□ 0.06
CKS1BP61024 AC003957.1-201ENST00000625108 2673 ntBASIC15.41■□□□□ 0.06
CKS1BP61024 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.41■□□□□ 0.06
CKS1BP61024 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CKS1BP61024 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.41■□□□□ 0.06
CKS1BP61024 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CKS1BP61024 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CKS1BP61024 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.4■□□□□ 0.06
CKS1BP61024 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS1BP61024 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 AL137060.1-201ENST00000618151 2648 ntBASIC15.4■□□□□ 0.06
CKS1BP61024 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.4■□□□□ 0.06
CKS1BP61024 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CKS1BP61024 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.4■□□□□ 0.06
CKS1BP61024 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CKS1BP61024 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CKS1BP61024 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.39■□□□□ 0.05
CKS1BP61024 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CKS1BP61024 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CKS1BP61024 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms