Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR2P43308 C9orf163-202ENST00000624034 2573 ntBASIC21.25■□□□□ 0.99
SSR2P43308 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR2P43308 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR2P43308 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.25■□□□□ 0.99
SSR2P43308 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR2P43308 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR2P43308 LINC01529-204ENST00000636474 1715 ntBASIC21.25■□□□□ 0.99
SSR2P43308 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.25■□□□□ 0.99
SSR2P43308 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SSR2P43308 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SSR2P43308 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR2P43308 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.24■□□□□ 0.99
SSR2P43308 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.24■□□□□ 0.99
SSR2P43308 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR2P43308 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SSR2P43308 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.24■□□□□ 0.99
SSR2P43308 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR2P43308 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SSR2P43308 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SSR2P43308 FP325331.1-202ENST00000623531 1380 ntBASIC21.23■□□□□ 0.99
SSR2P43308 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR2P43308 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SSR2P43308 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR2P43308 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR2P43308 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR2P43308 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SSR2P43308 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SSR2P43308 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SSR2P43308 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.23■□□□□ 0.99
SSR2P43308 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR2P43308 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR2P43308 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
SSR2P43308 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.22■□□□□ 0.99
SSR2P43308 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
SSR2P43308 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR2P43308 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SSR2P43308 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR2P43308 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SSR2P43308 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR2P43308 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR2P43308 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSR2P43308 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR2P43308 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.21■□□□□ 0.99
SSR2P43308 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.21■□□□□ 0.99
SSR2P43308 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.21■□□□□ 0.99
SSR2P43308 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR2P43308 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.21■□□□□ 0.99
SSR2P43308 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SSR2P43308 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SSR2P43308 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.2■□□□□ 0.98
SSR2P43308 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR2P43308 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR2P43308 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
SSR2P43308 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.2■□□□□ 0.98
SSR2P43308 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.2■□□□□ 0.98
SSR2P43308 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.2■□□□□ 0.98
SSR2P43308 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR2P43308 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.2■□□□□ 0.98
SSR2P43308 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.2■□□□□ 0.98
SSR2P43308 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR2P43308 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.19■□□□□ 0.98
SSR2P43308 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SSR2P43308 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR2P43308 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR2P43308 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.19■□□□□ 0.98
SSR2P43308 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.19■□□□□ 0.98
SSR2P43308 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR2P43308 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.19■□□□□ 0.98
SSR2P43308 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR2P43308 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 AC068473.5-201ENST00000616428 2072 ntBASIC21.19■□□□□ 0.98
SSR2P43308 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SSR2P43308 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.18■□□□□ 0.98
SSR2P43308 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.18■□□□□ 0.98
SSR2P43308 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR2P43308 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 DUX4L4-201ENST00000566884 1269 ntBASIC21.18■□□□□ 0.98
SSR2P43308 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR2P43308 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SSR2P43308 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.18■□□□□ 0.98
SSR2P43308 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.17■□□□□ 0.98
SSR2P43308 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.17■□□□□ 0.98
SSR2P43308 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SSR2P43308 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms