Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDNFP39905 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.35■□□□□ 0.69
GDNFP39905 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
GDNFP39905 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
GDNFP39905 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GDNFP39905 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDNFP39905 AC012354.3-201ENST00000623734 483 ntBASIC19.35■□□□□ 0.69
GDNFP39905 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.35■□□□□ 0.69
GDNFP39905 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GDNFP39905 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.34■□□□□ 0.69
GDNFP39905 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GDNFP39905 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.34■□□□□ 0.69
GDNFP39905 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.34■□□□□ 0.69
GDNFP39905 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 TSPY13P-201ENST00000338964 914 ntBASIC19.34■□□□□ 0.69
GDNFP39905 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.34■□□□□ 0.69
GDNFP39905 LONRF2P2-201ENST00000439212 571 ntBASIC19.34■□□□□ 0.69
GDNFP39905 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.34■□□□□ 0.69
GDNFP39905 AL033527.3-201ENST00000566366 1196 ntBASIC19.34■□□□□ 0.69
GDNFP39905 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.34■□□□□ 0.69
GDNFP39905 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.34■□□□□ 0.69
GDNFP39905 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
GDNFP39905 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
GDNFP39905 AL161729.1-201ENST00000604104 1402 ntBASIC19.34■□□□□ 0.69
GDNFP39905 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDNFP39905 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GDNFP39905 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.33■□□□□ 0.69
GDNFP39905 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GDNFP39905 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GDNFP39905 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
GDNFP39905 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.32■□□□□ 0.68
GDNFP39905 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 AC139795.1-202ENST00000500444 432 ntBASIC19.32■□□□□ 0.68
GDNFP39905 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.32■□□□□ 0.68
GDNFP39905 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.32■□□□□ 0.68
GDNFP39905 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.32■□□□□ 0.68
GDNFP39905 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GDNFP39905 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.31■□□□□ 0.68
GDNFP39905 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.31■□□□□ 0.68
GDNFP39905 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
GDNFP39905 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GDNFP39905 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
GDNFP39905 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDNFP39905 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDNFP39905 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GDNFP39905 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GDNFP39905 PVT1_1.1-201ENST00000615125 194 ntBASIC19.3■□□□□ 0.68
GDNFP39905 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.3■□□□□ 0.68
GDNFP39905 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.3■□□□□ 0.68
GDNFP39905 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.3■□□□□ 0.68
GDNFP39905 C11orf96-202ENST00000528572 1834 ntBASIC19.3■□□□□ 0.68
GDNFP39905 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GDNFP39905 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.29■□□□□ 0.68
GDNFP39905 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GDNFP39905 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.29■□□□□ 0.68
GDNFP39905 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.29■□□□□ 0.68
GDNFP39905 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.29■□□□□ 0.68
GDNFP39905 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.29■□□□□ 0.68
GDNFP39905 BHLHE23-202ENST00000612929 1109 ntBASIC19.29■□□□□ 0.68
GDNFP39905 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GDNFP39905 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GDNFP39905 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms