Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.95■□□□□ 0.78
SOX6P35712 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
SOX6P35712 FBXW4P1-201ENST00000426721 2239 ntBASIC19.95■□□□□ 0.78
SOX6P35712 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SOX6P35712 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX6P35712 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX6P35712 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SOX6P35712 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX6P35712 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX6P35712 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SOX6P35712 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX6P35712 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SOX6P35712 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SOX6P35712 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SOX6P35712 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.94■□□□□ 0.78
SOX6P35712 AL161729.1-201ENST00000604104 1402 ntBASIC19.93■□□□□ 0.78
SOX6P35712 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX6P35712 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SOX6P35712 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX6P35712 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX6P35712 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX6P35712 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SOX6P35712 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SOX6P35712 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.93■□□□□ 0.78
SOX6P35712 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SOX6P35712 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
SOX6P35712 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX6P35712 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.92■□□□□ 0.78
SOX6P35712 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SOX6P35712 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SOX6P35712 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX6P35712 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SOX6P35712 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SOX6P35712 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.92■□□□□ 0.78
SOX6P35712 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.92■□□□□ 0.78
SOX6P35712 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SOX6P35712 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.91■□□□□ 0.78
SOX6P35712 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.91■□□□□ 0.78
SOX6P35712 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SOX6P35712 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SOX6P35712 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SOX6P35712 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.9■□□□□ 0.78
SOX6P35712 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX6P35712 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.9■□□□□ 0.78
SOX6P35712 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX6P35712 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX6P35712 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX6P35712 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SOX6P35712 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.9■□□□□ 0.78
SOX6P35712 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.78
SOX6P35712 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SOX6P35712 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SOX6P35712 AC139530.1-201ENST00000575312 1977 ntBASIC19.89■□□□□ 0.77
SOX6P35712 MIR4449-201ENST00000578365 66 ntBASIC19.89■□□□□ 0.77
SOX6P35712 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SOX6P35712 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SOX6P35712 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.88■□□□□ 0.77
SOX6P35712 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SOX6P35712 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX6P35712 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SOX6P35712 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.87■□□□□ 0.77
SOX6P35712 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SOX6P35712 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
SOX6P35712 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX6P35712 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.87■□□□□ 0.77
SOX6P35712 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.87■□□□□ 0.77
SOX6P35712 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SOX6P35712 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX6P35712 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SOX6P35712 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SOX6P35712 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms