Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
SAA4P35542 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.07■□□□□ 0.48
SAA4P35542 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SAA4P35542 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SAA4P35542 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 AC133637.1-201ENST00000624115 1537 ntBASIC18.07■□□□□ 0.48
SAA4P35542 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SAA4P35542 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
SAA4P35542 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.06■□□□□ 0.48
SAA4P35542 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SAA4P35542 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SAA4P35542 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.06■□□□□ 0.48
SAA4P35542 AL499627.2-201ENST00000606283 725 ntBASIC18.06■□□□□ 0.48
SAA4P35542 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SAA4P35542 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.05■□□□□ 0.48
SAA4P35542 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
SAA4P35542 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 AC099791.1-201ENST00000416440 715 ntBASIC18.05■□□□□ 0.48
SAA4P35542 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.05■□□□□ 0.48
SAA4P35542 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SAA4P35542 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.05■□□□□ 0.48
SAA4P35542 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.05■□□□□ 0.48
SAA4P35542 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.04■□□□□ 0.48
SAA4P35542 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SAA4P35542 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA4P35542 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.04■□□□□ 0.48
SAA4P35542 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SAA4P35542 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.04■□□□□ 0.48
SAA4P35542 BX842568.3-201ENST00000418104 571 ntBASIC18.04■□□□□ 0.48
SAA4P35542 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SAA4P35542 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.04■□□□□ 0.48
SAA4P35542 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA4P35542 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA4P35542 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SAA4P35542 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SAA4P35542 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.04■□□□□ 0.48
SAA4P35542 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA4P35542 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SAA4P35542 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SAA4P35542 RASA4CP-201ENST00000424092 1398 ntBASIC18.04■□□□□ 0.48
SAA4P35542 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.03■□□□□ 0.48
SAA4P35542 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.03■□□□□ 0.48
SAA4P35542 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA4P35542 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA4P35542 AC105265.2-201ENST00000467189 838 ntBASIC18.03■□□□□ 0.48
SAA4P35542 AC233992.3-201ENST00000607491 485 ntBASIC18.03■□□□□ 0.48
SAA4P35542 CA15P2-201ENST00000611168 834 ntBASIC18.03■□□□□ 0.48
SAA4P35542 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
SAA4P35542 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA4P35542 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SAA4P35542 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SAA4P35542 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.02■□□□□ 0.48
SAA4P35542 MIR935-201ENST00000401179 91 ntBASIC18.02■□□□□ 0.48
SAA4P35542 ZNRF2P3-201ENST00000424200 374 ntBASIC18.02■□□□□ 0.48
SAA4P35542 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SAA4P35542 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.02■□□□□ 0.48
SAA4P35542 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SAA4P35542 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SAA4P35542 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.02■□□□□ 0.47
SAA4P35542 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
SAA4P35542 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SAA4P35542 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.01■□□□□ 0.47
SAA4P35542 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.01■□□□□ 0.47
SAA4P35542 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 SLC47A1P1-202ENST00000449666 945 ntBASIC18.01■□□□□ 0.47
SAA4P35542 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.01■□□□□ 0.47
SAA4P35542 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SAA4P35542 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms