Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.84■■□□□ 1.09
VARSP26640 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
VARSP26640 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.84■■□□□ 1.09
VARSP26640 MIR6722-201ENST00000617286 78 ntBASIC21.84■■□□□ 1.09
VARSP26640 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
VARSP26640 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.84■■□□□ 1.09
VARSP26640 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.83■■□□□ 1.09
VARSP26640 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
VARSP26640 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VARSP26640 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.83■■□□□ 1.09
VARSP26640 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.83■■□□□ 1.09
VARSP26640 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.83■■□□□ 1.09
VARSP26640 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.83■■□□□ 1.09
VARSP26640 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
VARSP26640 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.83■■□□□ 1.08
VARSP26640 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
VARSP26640 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
VARSP26640 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.82■■□□□ 1.08
VARSP26640 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.82■■□□□ 1.08
VARSP26640 MTDHP2-201ENST00000601468 714 ntBASIC21.82■■□□□ 1.08
VARSP26640 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.82■■□□□ 1.08
VARSP26640 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VARSP26640 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VARSP26640 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 AC092068.2-201ENST00000590491 1708 ntBASIC21.81■■□□□ 1.08
VARSP26640 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VARSP26640 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
VARSP26640 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VARSP26640 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VARSP26640 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARSP26640 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.8■■□□□ 1.08
VARSP26640 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VARSP26640 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.8■■□□□ 1.08
VARSP26640 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.8■■□□□ 1.08
VARSP26640 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.8■■□□□ 1.08
VARSP26640 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VARSP26640 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
VARSP26640 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VARSP26640 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VARSP26640 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.79■■□□□ 1.08
VARSP26640 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARSP26640 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARSP26640 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARSP26640 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VARSP26640 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.79■■□□□ 1.08
VARSP26640 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.79■■□□□ 1.08
VARSP26640 AC010997.5-201ENST00000609182 354 ntBASIC21.79■■□□□ 1.08
VARSP26640 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VARSP26640 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.79■■□□□ 1.08
VARSP26640 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VARSP26640 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
VARSP26640 DUSP8P3-201ENST00000399571 1760 ntBASIC21.79■■□□□ 1.08
VARSP26640 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
VARSP26640 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VARSP26640 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.78■■□□□ 1.08
VARSP26640 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.78■■□□□ 1.08
VARSP26640 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VARSP26640 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VARSP26640 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VARSP26640 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARSP26640 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.08
VARSP26640 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARSP26640 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.77■■□□□ 1.08
VARSP26640 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VARSP26640 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VARSP26640 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.77■■□□□ 1.08
VARSP26640 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
VARSP26640 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.77■■□□□ 1.08
VARSP26640 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VARSP26640 AC005703.6-201ENST00000623265 1329 ntBASIC21.77■■□□□ 1.07
VARSP26640 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.77■■□□□ 1.07
VARSP26640 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.76■■□□□ 1.07
VARSP26640 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VARSP26640 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms