Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH3P22223 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.73■■□□□ 1.07
CDH3P22223 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH3P22223 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH3P22223 SYT6-210ENST00000641643 1587 ntBASIC21.73■■□□□ 1.07
CDH3P22223 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CDH3P22223 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH3P22223 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH3P22223 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH3P22223 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH3P22223 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH3P22223 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDH3P22223 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH3P22223 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH3P22223 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH3P22223 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH3P22223 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH3P22223 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH3P22223 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH3P22223 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH3P22223 AC106739.1-201ENST00000617035 715 ntBASIC21.71■■□□□ 1.07
CDH3P22223 AC241377.3-202ENST00000626088 1088 ntBASIC21.71■■□□□ 1.07
CDH3P22223 AC241585.3-202ENST00000628937 1088 ntBASIC21.71■■□□□ 1.07
CDH3P22223 AC245100.8-202ENST00000629247 1058 ntBASIC21.71■■□□□ 1.07
CDH3P22223 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH3P22223 AC135279.3-201ENST00000610945 1311 ntBASIC21.71■■□□□ 1.07
CDH3P22223 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH3P22223 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH3P22223 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH3P22223 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH3P22223 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
CDH3P22223 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDH3P22223 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH3P22223 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDH3P22223 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH3P22223 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH3P22223 AC024257.2-201ENST00000549699 147 ntBASIC21.68■■□□□ 1.06
CDH3P22223 AC005837.3-201ENST00000612163 286 ntBASIC21.68■■□□□ 1.06
CDH3P22223 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH3P22223 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH3P22223 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDH3P22223 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CDH3P22223 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH3P22223 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH3P22223 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH3P22223 AC133561.4-201ENST00000566112 224 ntBASIC21.67■■□□□ 1.06
CDH3P22223 AC009086.3-201ENST00000623486 1008 ntBASIC21.67■■□□□ 1.06
CDH3P22223 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH3P22223 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CDH3P22223 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDH3P22223 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.66■■□□□ 1.06
CDH3P22223 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
CDH3P22223 AC004812.2-201ENST00000611079 2094 ntBASIC21.66■■□□□ 1.06
CDH3P22223 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDH3P22223 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH3P22223 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH3P22223 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH3P22223 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH3P22223 SERBP1P1-201ENST00000396021 1160 ntBASIC21.65■■□□□ 1.06
CDH3P22223 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH3P22223 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
CDH3P22223 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH3P22223 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.65■■□□□ 1.06
CDH3P22223 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH3P22223 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH3P22223 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH3P22223 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CDH3P22223 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.64■■□□□ 1.06
CDH3P22223 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH3P22223 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms