Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC079630.1-202ENST00000618127 1840 ntBASIC19.53■□□□□ 0.72
RAB3BP20337 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RAB3BP20337 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB3BP20337 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RAB3BP20337 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB3BP20337 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RAB3BP20337 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB3BP20337 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB3BP20337 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3BP20337 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB3BP20337 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB3BP20337 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3BP20337 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3BP20337 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3BP20337 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB3BP20337 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RAB3BP20337 AC131274.2-201ENST00000580697 1507 ntBASIC19.51■□□□□ 0.71
RAB3BP20337 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RAB3BP20337 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB3BP20337 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
RAB3BP20337 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.51■□□□□ 0.71
RAB3BP20337 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3BP20337 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB3BP20337 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB3BP20337 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RAB3BP20337 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB3BP20337 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB3BP20337 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RAB3BP20337 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.5■□□□□ 0.71
RAB3BP20337 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3BP20337 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
RAB3BP20337 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB3BP20337 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RAB3BP20337 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB3BP20337 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3BP20337 FBXW4P1-201ENST00000426721 2239 ntBASIC19.49■□□□□ 0.71
RAB3BP20337 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3BP20337 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3BP20337 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3BP20337 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3BP20337 AC009831.1-201ENST00000580420 1582 ntBASIC19.49■□□□□ 0.71
RAB3BP20337 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB3BP20337 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3BP20337 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3BP20337 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3BP20337 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3BP20337 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3BP20337 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3BP20337 AC133552.2-201ENST00000619106 1032 ntBASIC19.48■□□□□ 0.71
RAB3BP20337 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3BP20337 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RAB3BP20337 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3BP20337 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAB3BP20337 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3BP20337 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAB3BP20337 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3BP20337 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3BP20337 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3BP20337 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3BP20337 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAB3BP20337 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3BP20337 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3BP20337 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB3BP20337 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3BP20337 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3BP20337 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms