Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.56■□□□□ 0.72
ATF1P18846 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF1P18846 AC004987.1-201ENST00000428627 508 ntBASIC19.56■□□□□ 0.72
ATF1P18846 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF1P18846 AC120024.1-201ENST00000562672 995 ntBASIC19.56■□□□□ 0.72
ATF1P18846 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.56■□□□□ 0.72
ATF1P18846 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.56■□□□□ 0.72
ATF1P18846 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ATF1P18846 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF1P18846 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF1P18846 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.55■□□□□ 0.72
ATF1P18846 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.55■□□□□ 0.72
ATF1P18846 ATP5G2P3-201ENST00000429083 425 ntBASIC19.55■□□□□ 0.72
ATF1P18846 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.55■□□□□ 0.72
ATF1P18846 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.55■□□□□ 0.72
ATF1P18846 AC074183.2-201ENST00000623112 922 ntBASIC19.55■□□□□ 0.72
ATF1P18846 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ATF1P18846 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF1P18846 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.55■□□□□ 0.72
ATF1P18846 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ATF1P18846 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ATF1P18846 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ATF1P18846 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ATF1P18846 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.54■□□□□ 0.72
ATF1P18846 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATF1P18846 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.54■□□□□ 0.72
ATF1P18846 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ATF1P18846 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ATF1P18846 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ATF1P18846 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.54■□□□□ 0.72
ATF1P18846 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ATF1P18846 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ATF1P18846 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.53■□□□□ 0.72
ATF1P18846 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ATF1P18846 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.53■□□□□ 0.72
ATF1P18846 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.52■□□□□ 0.72
ATF1P18846 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATF1P18846 AC139530.1-201ENST00000575312 1977 ntBASIC19.52■□□□□ 0.72
ATF1P18846 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATF1P18846 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.52■□□□□ 0.72
ATF1P18846 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ATF1P18846 PVT1_1.1-201ENST00000615125 194 ntBASIC19.52■□□□□ 0.72
ATF1P18846 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ATF1P18846 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ATF1P18846 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.52■□□□□ 0.72
ATF1P18846 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ATF1P18846 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 KRT18P24-201ENST00000344739 1156 ntBASIC19.51■□□□□ 0.71
ATF1P18846 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ATF1P18846 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ATF1P18846 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ATF1P18846 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.5■□□□□ 0.71
ATF1P18846 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ATF1P18846 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ATF1P18846 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.5■□□□□ 0.71
ATF1P18846 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF1P18846 C11orf96-202ENST00000528572 1834 ntBASIC19.49■□□□□ 0.71
ATF1P18846 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ATF1P18846 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.49■□□□□ 0.71
ATF1P18846 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATF1P18846 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ATF1P18846 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.49■□□□□ 0.71
ATF1P18846 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms