Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A1P12107 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A1P12107 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A1P12107 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
COL11A1P12107 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A1P12107 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.72■■□□□ 1.71
COL11A1P12107 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A1P12107 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A1P12107 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.72■■□□□ 1.71
COL11A1P12107 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 KRT18P14-201ENST00000534205 1250 ntBASIC25.71■■□□□ 1.71
COL11A1P12107 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
COL11A1P12107 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
COL11A1P12107 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.71■■□□□ 1.71
COL11A1P12107 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A1P12107 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
COL11A1P12107 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL11A1P12107 YBX1P1-201ENST00000445822 960 ntBASIC25.7■■□□□ 1.71
COL11A1P12107 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.7■■□□□ 1.71
COL11A1P12107 LINC00543-201ENST00000567234 1845 ntBASIC25.7■■□□□ 1.71
COL11A1P12107 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.7■■□□□ 1.7
COL11A1P12107 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A1P12107 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A1P12107 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
COL11A1P12107 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A1P12107 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A1P12107 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.7■■□□□ 1.7
COL11A1P12107 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.7■■□□□ 1.7
COL11A1P12107 MIR6084-201ENST00000622012 110 ntBASIC25.7■■□□□ 1.7
COL11A1P12107 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A1P12107 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
COL11A1P12107 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
COL11A1P12107 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.69■■□□□ 1.7
COL11A1P12107 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A1P12107 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A1P12107 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A1P12107 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A1P12107 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
COL11A1P12107 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A1P12107 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.67■■□□□ 1.7
COL11A1P12107 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.67■■□□□ 1.7
COL11A1P12107 AL354811.1-201ENST00000610286 706 ntBASIC25.67■■□□□ 1.7
COL11A1P12107 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A1P12107 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A1P12107 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.67■■□□□ 1.7
COL11A1P12107 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.67■■□□□ 1.7
COL11A1P12107 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.67■■□□□ 1.7
COL11A1P12107 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.67■■□□□ 1.7
COL11A1P12107 DUX4L4-201ENST00000566884 1269 ntBASIC25.67■■□□□ 1.7
COL11A1P12107 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.67■■□□□ 1.7
COL11A1P12107 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A1P12107 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.66■■□□□ 1.7
COL11A1P12107 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL11A1P12107 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A1P12107 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A1P12107 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.66■■□□□ 1.7
COL11A1P12107 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
COL11A1P12107 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.66■■□□□ 1.7
COL11A1P12107 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A1P12107 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A1P12107 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.65■■□□□ 1.7
COL11A1P12107 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.65■■□□□ 1.7
COL11A1P12107 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.65■■□□□ 1.7
COL11A1P12107 AC090192.1-201ENST00000517740 490 ntBASIC25.65■■□□□ 1.7
COL11A1P12107 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL11A1P12107 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL11A1P12107 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.65■■□□□ 1.7
COL11A1P12107 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.65■■□□□ 1.7
COL11A1P12107 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL11A1P12107 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A1P12107 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.65■■□□□ 1.7
COL11A1P12107 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.65■■□□□ 1.7
COL11A1P12107 AC123595.1-201ENST00000440769 1046 ntBASIC25.65■■□□□ 1.7
COL11A1P12107 CCDC92B-201ENST00000575506 885 ntBASIC25.65■■□□□ 1.7
COL11A1P12107 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.64■■□□□ 1.7
COL11A1P12107 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.64■■□□□ 1.7
COL11A1P12107 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A1P12107 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A1P12107 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A1P12107 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
COL11A1P12107 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.64■■□□□ 1.7
COL11A1P12107 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.64■■□□□ 1.7
COL11A1P12107 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.64■■□□□ 1.7
COL11A1P12107 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A1P12107 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A1P12107 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.63■■□□□ 1.69
COL11A1P12107 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
COL11A1P12107 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
COL11A1P12107 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A1P12107 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 358.2 ms