Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 AC004812.2-201ENST00000611079 2094 ntBASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 MIR5787-201ENST00000611784 55 ntBASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 AC009086.3-201ENST00000623486 1008 ntBASIC21.42■■□□□ 1.02
CCNYL3P0C7X3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNYL3P0C7X3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 AC136469.2-201ENST00000623944 1028 ntBASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNYL3P0C7X3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.39■■□□□ 1.02
CCNYL3P0C7X3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 AC026271.2-201ENST00000428091 497 ntBASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNYL3P0C7X3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCNYL3P0C7X3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 AC099791.1-201ENST00000416440 715 ntBASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.37■■□□□ 1.01
CCNYL3P0C7X3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 MIR3181-201ENST00000578512 73 ntBASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 AC092666.2-201ENST00000613287 246 ntBASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.36■■□□□ 1.01
CCNYL3P0C7X3 IRS3P-201ENST00000223076 1006 ntBASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 AC006455.2-201ENST00000429931 906 ntBASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 AC233992.3-201ENST00000607491 485 ntBASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCNYL3P0C7X3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms