Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
MRPL3P09001 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
MRPL3P09001 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
MRPL3P09001 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.97■□□□□ 0.79
MRPL3P09001 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MRPL3P09001 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.96■□□□□ 0.79
MRPL3P09001 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 MIR4281-201ENST00000580852 62 ntBASIC19.96■□□□□ 0.79
MRPL3P09001 THA1P-201ENST00000590384 1145 ntBASIC19.96■□□□□ 0.79
MRPL3P09001 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.96■□□□□ 0.79
MRPL3P09001 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.96■□□□□ 0.79
MRPL3P09001 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.96■□□□□ 0.79
MRPL3P09001 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
MRPL3P09001 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MRPL3P09001 AC127496.7-201ENST00000625110 1798 ntBASIC19.95■□□□□ 0.78
MRPL3P09001 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL3P09001 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL3P09001 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.95■□□□□ 0.78
MRPL3P09001 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MRPL3P09001 ABHD17AP5-201ENST00000580133 923 ntBASIC19.95■□□□□ 0.78
MRPL3P09001 NTF6A-201ENST00000591175 560 ntBASIC19.95■□□□□ 0.78
MRPL3P09001 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL3P09001 AL353803.4-201ENST00000565882 1934 ntBASIC19.95■□□□□ 0.78
MRPL3P09001 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL3P09001 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
MRPL3P09001 AC242852.2-201ENST00000615738 1807 ntBASIC19.95■□□□□ 0.78
MRPL3P09001 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
MRPL3P09001 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.94■□□□□ 0.78
MRPL3P09001 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MRPL3P09001 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.94■□□□□ 0.78
MRPL3P09001 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MRPL3P09001 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
MRPL3P09001 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
MRPL3P09001 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.94■□□□□ 0.78
MRPL3P09001 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.94■□□□□ 0.78
MRPL3P09001 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MRPL3P09001 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.93■□□□□ 0.78
MRPL3P09001 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.93■□□□□ 0.78
MRPL3P09001 PVT1_1.1-201ENST00000615125 194 ntBASIC19.93■□□□□ 0.78
MRPL3P09001 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
MRPL3P09001 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.93■□□□□ 0.78
MRPL3P09001 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
MRPL3P09001 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MRPL3P09001 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
MRPL3P09001 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.92■□□□□ 0.78
MRPL3P09001 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 ESRRAP2-201ENST00000418437 1549 ntBASIC19.92■□□□□ 0.78
MRPL3P09001 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
MRPL3P09001 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
MRPL3P09001 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.92■□□□□ 0.78
MRPL3P09001 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.92■□□□□ 0.78
MRPL3P09001 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MRPL3P09001 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MRPL3P09001 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.91■□□□□ 0.78
MRPL3P09001 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.91■□□□□ 0.78
MRPL3P09001 AC004987.1-201ENST00000428627 508 ntBASIC19.91■□□□□ 0.78
MRPL3P09001 AC004448.1-201ENST00000458332 883 ntBASIC19.91■□□□□ 0.78
MRPL3P09001 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.91■□□□□ 0.78
MRPL3P09001 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.91■□□□□ 0.78
MRPL3P09001 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.91■□□□□ 0.78
MRPL3P09001 AC010980.1-201ENST00000587192 1142 ntBASIC19.91■□□□□ 0.78
MRPL3P09001 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MRPL3P09001 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms