Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MT-CO3P00414 HLA-L-209ENST00000420110 1011 ntBASIC21.39■■□□□ 1.01
MT-CO3P00414 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-CO3P00414 DUX4L4-201ENST00000566884 1269 ntBASIC21.39■■□□□ 1.01
MT-CO3P00414 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-CO3P00414 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
MT-CO3P00414 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.39■■□□□ 1.01
MT-CO3P00414 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-CO3P00414 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO3P00414 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.38■■□□□ 1.01
MT-CO3P00414 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-CO3P00414 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.38■■□□□ 1.01
MT-CO3P00414 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.38■■□□□ 1.01
MT-CO3P00414 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.38■■□□□ 1.01
MT-CO3P00414 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO3P00414 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-CO3P00414 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-CO3P00414 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO3P00414 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.37■■□□□ 1.01
MT-CO3P00414 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO3P00414 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.37■■□□□ 1.01
MT-CO3P00414 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.37■■□□□ 1.01
MT-CO3P00414 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.37■■□□□ 1.01
MT-CO3P00414 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
MT-CO3P00414 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
MT-CO3P00414 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-CO3P00414 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-CO3P00414 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.36■■□□□ 1.01
MT-CO3P00414 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.36■■□□□ 1.01
MT-CO3P00414 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO3P00414 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.36■■□□□ 1.01
MT-CO3P00414 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-CO3P00414 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
MT-CO3P00414 AC080038.1-201ENST00000611274 1154 ntBASIC21.36■■□□□ 1.01
MT-CO3P00414 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
MT-CO3P00414 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO3P00414 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO3P00414 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-CO3P00414 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO3P00414 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MT-CO3P00414 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO3P00414 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO3P00414 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.35■■□□□ 1.01
MT-CO3P00414 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO3P00414 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO3P00414 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO3P00414 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO3P00414 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
MT-CO3P00414 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO3P00414 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
MT-CO3P00414 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
MT-CO3P00414 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.34■■□□□ 1.01
MT-CO3P00414 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-CO3P00414 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-CO3P00414 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-CO3P00414 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MT-CO3P00414 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO3P00414 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-CO3P00414 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
MT-CO3P00414 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.33■■□□□ 1.01
MT-CO3P00414 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.33■■□□□ 1.01
MT-CO3P00414 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
MT-CO3P00414 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO3P00414 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.33■■□□□ 1.01
MT-CO3P00414 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.33■■□□□ 1
MT-CO3P00414 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MT-CO3P00414 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.33■■□□□ 1
MT-CO3P00414 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.33■■□□□ 1
MT-CO3P00414 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MT-CO3P00414 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.32■■□□□ 1
MT-CO3P00414 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
MT-CO3P00414 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 AC016769.1-201ENST00000409132 1010 ntBASIC21.32■■□□□ 1
MT-CO3P00414 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
MT-CO3P00414 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO3P00414 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.31■■□□□ 1
MT-CO3P00414 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO3P00414 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.31■■□□□ 1
MT-CO3P00414 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.31■■□□□ 1
MT-CO3P00414 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO3P00414 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO3P00414 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.31■■□□□ 1
MT-CO3P00414 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms