Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 AC138932.1-201ENST00000534164 6830 ntBASIC19■□□□□ 0.63
TSPAN9O75954 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TSPAN9O75954 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19■□□□□ 0.63
TSPAN9O75954 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19■□□□□ 0.63
TSPAN9O75954 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
TSPAN9O75954 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TSPAN9O75954 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 AC239859.2-201ENST00000444165 318 ntBASIC18.99■□□□□ 0.63
TSPAN9O75954 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.99■□□□□ 0.63
TSPAN9O75954 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN9O75954 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.99■□□□□ 0.63
TSPAN9O75954 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.98■□□□□ 0.63
TSPAN9O75954 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN9O75954 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN9O75954 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.98■□□□□ 0.63
TSPAN9O75954 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
TSPAN9O75954 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN9O75954 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.97■□□□□ 0.63
TSPAN9O75954 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.97■□□□□ 0.63
TSPAN9O75954 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.97■□□□□ 0.63
TSPAN9O75954 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN9O75954 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN9O75954 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN9O75954 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN9O75954 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
TSPAN9O75954 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TSPAN9O75954 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 KRT18P24-201ENST00000344739 1156 ntBASIC18.96■□□□□ 0.63
TSPAN9O75954 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 THA1P-201ENST00000590384 1145 ntBASIC18.96■□□□□ 0.63
TSPAN9O75954 AC131212.1-201ENST00000613771 668 ntBASIC18.96■□□□□ 0.63
TSPAN9O75954 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.96■□□□□ 0.63
TSPAN9O75954 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN9O75954 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.95■□□□□ 0.62
TSPAN9O75954 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TSPAN9O75954 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TSPAN9O75954 AC097639.1-201ENST00000565519 1891 ntBASIC18.95■□□□□ 0.62
TSPAN9O75954 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 AL592295.1-201ENST00000400984 884 ntBASIC18.95■□□□□ 0.62
TSPAN9O75954 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
TSPAN9O75954 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.95■□□□□ 0.62
TSPAN9O75954 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TSPAN9O75954 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TSPAN9O75954 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TSPAN9O75954 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.94■□□□□ 0.62
TSPAN9O75954 AL356441.2-201ENST00000443009 864 ntBASIC18.94■□□□□ 0.62
TSPAN9O75954 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.94■□□□□ 0.62
TSPAN9O75954 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.94■□□□□ 0.62
TSPAN9O75954 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
TSPAN9O75954 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TSPAN9O75954 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 AL137060.1-201ENST00000618151 2648 ntBASIC18.93■□□□□ 0.62
TSPAN9O75954 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TSPAN9O75954 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.93■□□□□ 0.62
TSPAN9O75954 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms