Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP200O75643 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP200O75643 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SNRNP200O75643 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
SNRNP200O75643 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.46■■□□□ 1.03
SNRNP200O75643 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP200O75643 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.46■■□□□ 1.03
SNRNP200O75643 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SNRNP200O75643 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.45■■□□□ 1.02
SNRNP200O75643 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP200O75643 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SNRNP200O75643 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP200O75643 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP200O75643 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.45■■□□□ 1.02
SNRNP200O75643 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
SNRNP200O75643 AF213884.3-201ENST00000563833 479 ntBASIC21.45■■□□□ 1.02
SNRNP200O75643 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SNRNP200O75643 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP200O75643 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SNRNP200O75643 AC010525.1-201ENST00000585559 441 ntBASIC21.44■■□□□ 1.02
SNRNP200O75643 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.44■■□□□ 1.02
SNRNP200O75643 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
SNRNP200O75643 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.44■■□□□ 1.02
SNRNP200O75643 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.44■■□□□ 1.02
SNRNP200O75643 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
SNRNP200O75643 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SNRNP200O75643 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP200O75643 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SNRNP200O75643 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.43■■□□□ 1.02
SNRNP200O75643 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SNRNP200O75643 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP200O75643 AL138724.1-201ENST00000606771 1088 ntBASIC21.43■■□□□ 1.02
SNRNP200O75643 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SNRNP200O75643 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
SNRNP200O75643 AC009086.3-201ENST00000623486 1008 ntBASIC21.42■■□□□ 1.02
SNRNP200O75643 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.42■■□□□ 1.02
SNRNP200O75643 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SNRNP200O75643 DUSP8P3-201ENST00000399571 1760 ntBASIC21.42■■□□□ 1.02
SNRNP200O75643 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SNRNP200O75643 PBX2P1-201ENST00000493219 1291 ntBASIC21.41■■□□□ 1.02
SNRNP200O75643 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.41■■□□□ 1.02
SNRNP200O75643 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.41■■□□□ 1.02
SNRNP200O75643 AL136162.1-201ENST00000607711 1078 ntBASIC21.41■■□□□ 1.02
SNRNP200O75643 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.41■■□□□ 1.02
SNRNP200O75643 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.41■■□□□ 1.02
SNRNP200O75643 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.41■■□□□ 1.02
SNRNP200O75643 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SNRNP200O75643 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.41■■□□□ 1.02
SNRNP200O75643 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.41■■□□□ 1.02
SNRNP200O75643 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SNRNP200O75643 AC133561.4-201ENST00000566112 224 ntBASIC21.41■■□□□ 1.02
SNRNP200O75643 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SNRNP200O75643 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
SNRNP200O75643 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP200O75643 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP200O75643 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.4■■□□□ 1.02
SNRNP200O75643 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP200O75643 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.4■■□□□ 1.02
SNRNP200O75643 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP200O75643 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SNRNP200O75643 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.4■■□□□ 1.02
SNRNP200O75643 EDA-201ENST00000338901 1233 ntBASIC21.4■■□□□ 1.02
SNRNP200O75643 MIR4767-201ENST00000582827 78 ntBASIC21.4■■□□□ 1.02
SNRNP200O75643 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.4■■□□□ 1.02
SNRNP200O75643 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.4■■□□□ 1.02
SNRNP200O75643 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.4■■□□□ 1.02
SNRNP200O75643 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.4■■□□□ 1.02
SNRNP200O75643 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.4■■□□□ 1.02
SNRNP200O75643 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP200O75643 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP200O75643 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.39■■□□□ 1.02
SNRNP200O75643 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SNRNP200O75643 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP200O75643 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP200O75643 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.39■■□□□ 1.01
SNRNP200O75643 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.39■■□□□ 1.01
SNRNP200O75643 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SNRNP200O75643 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP200O75643 MIR3181-201ENST00000578512 73 ntBASIC21.39■■□□□ 1.01
SNRNP200O75643 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SNRNP200O75643 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SNRNP200O75643 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SNRNP200O75643 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms