Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UPK3AO75631 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.99■□□□□ 0.79
UPK3AO75631 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UPK3AO75631 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.98■□□□□ 0.79
UPK3AO75631 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 AL356740.2-201ENST00000601559 647 ntBASIC19.98■□□□□ 0.79
UPK3AO75631 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UPK3AO75631 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UPK3AO75631 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
UPK3AO75631 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
UPK3AO75631 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 MIR3621-201ENST00000580529 85 ntBASIC19.97■□□□□ 0.79
UPK3AO75631 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.97■□□□□ 0.79
UPK3AO75631 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.97■□□□□ 0.79
UPK3AO75631 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
UPK3AO75631 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.96■□□□□ 0.79
UPK3AO75631 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.96■□□□□ 0.79
UPK3AO75631 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.96■□□□□ 0.79
UPK3AO75631 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UPK3AO75631 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.95■□□□□ 0.79
UPK3AO75631 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.95■□□□□ 0.78
UPK3AO75631 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
UPK3AO75631 EP400NL-214ENST00000641289 2402 ntBASIC19.95■□□□□ 0.78
UPK3AO75631 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 AC131212.1-201ENST00000613771 668 ntBASIC19.95■□□□□ 0.78
UPK3AO75631 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.95■□□□□ 0.78
UPK3AO75631 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.95■□□□□ 0.78
UPK3AO75631 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPK3AO75631 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
UPK3AO75631 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.94■□□□□ 0.78
UPK3AO75631 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UPK3AO75631 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.94■□□□□ 0.78
UPK3AO75631 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.94■□□□□ 0.78
UPK3AO75631 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPK3AO75631 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UPK3AO75631 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
UPK3AO75631 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPK3AO75631 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK3AO75631 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UPK3AO75631 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK3AO75631 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK3AO75631 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.93■□□□□ 0.78
UPK3AO75631 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.93■□□□□ 0.78
UPK3AO75631 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.93■□□□□ 0.78
UPK3AO75631 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPK3AO75631 AC009102.2-201ENST00000606772 1639 ntBASIC19.93■□□□□ 0.78
UPK3AO75631 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK3AO75631 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK3AO75631 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPK3AO75631 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UPK3AO75631 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.92■□□□□ 0.78
UPK3AO75631 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.92■□□□□ 0.78
UPK3AO75631 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.92■□□□□ 0.78
UPK3AO75631 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UPK3AO75631 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms