Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20■□□□□ 0.79
CXCL13O43927 AC106739.1-201ENST00000617035 715 ntBASIC20■□□□□ 0.79
CXCL13O43927 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CXCL13O43927 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL13O43927 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL13O43927 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL13O43927 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.99■□□□□ 0.79
CXCL13O43927 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL13O43927 AL138724.1-201ENST00000606771 1088 ntBASIC19.99■□□□□ 0.79
CXCL13O43927 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.99■□□□□ 0.79
CXCL13O43927 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CXCL13O43927 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CXCL13O43927 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL13O43927 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCL13O43927 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.98■□□□□ 0.79
CXCL13O43927 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL13O43927 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
CXCL13O43927 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCL13O43927 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.98■□□□□ 0.79
CXCL13O43927 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CXCL13O43927 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL13O43927 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.98■□□□□ 0.79
CXCL13O43927 AL353803.4-201ENST00000565882 1934 ntBASIC19.98■□□□□ 0.79
CXCL13O43927 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CXCL13O43927 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.97■□□□□ 0.79
CXCL13O43927 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL13O43927 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL13O43927 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 MIR638-201ENST00000385237 100 ntBASIC19.97■□□□□ 0.79
CXCL13O43927 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.97■□□□□ 0.79
CXCL13O43927 AC011298.3-201ENST00000615796 283 ntBASIC19.97■□□□□ 0.79
CXCL13O43927 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL13O43927 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL13O43927 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CXCL13O43927 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
CXCL13O43927 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL13O43927 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL13O43927 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CXCL13O43927 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CXCL13O43927 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.96■□□□□ 0.79
CXCL13O43927 MIR4767-201ENST00000582827 78 ntBASIC19.96■□□□□ 0.79
CXCL13O43927 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.96■□□□□ 0.79
CXCL13O43927 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CXCL13O43927 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.95■□□□□ 0.78
CXCL13O43927 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CXCL13O43927 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL13O43927 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.95■□□□□ 0.78
CXCL13O43927 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CXCL13O43927 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL13O43927 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL13O43927 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CXCL13O43927 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL13O43927 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.94■□□□□ 0.78
CXCL13O43927 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.94■□□□□ 0.78
CXCL13O43927 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CXCL13O43927 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL13O43927 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL13O43927 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.94■□□□□ 0.78
CXCL13O43927 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.94■□□□□ 0.78
CXCL13O43927 AL499627.2-201ENST00000606283 725 ntBASIC19.94■□□□□ 0.78
CXCL13O43927 AC136469.2-201ENST00000623944 1028 ntBASIC19.94■□□□□ 0.78
CXCL13O43927 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL13O43927 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CXCL13O43927 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CXCL13O43927 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 AC092068.2-201ENST00000590491 1708 ntBASIC19.93■□□□□ 0.78
CXCL13O43927 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCL13O43927 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCL13O43927 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCL13O43927 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.93■□□□□ 0.78
CXCL13O43927 AC133561.4-201ENST00000566112 224 ntBASIC19.93■□□□□ 0.78
CXCL13O43927 AC005837.3-201ENST00000612163 286 ntBASIC19.93■□□□□ 0.78
CXCL13O43927 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.93■□□□□ 0.78
CXCL13O43927 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CXCL13O43927 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CXCL13O43927 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CXCL13O43927 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms