Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGCEO43556 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SGCEO43556 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SGCEO43556 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.64■□□□□ 0.73
SGCEO43556 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SGCEO43556 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGCEO43556 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.64■□□□□ 0.73
SGCEO43556 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SGCEO43556 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGCEO43556 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.63■□□□□ 0.73
SGCEO43556 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.63■□□□□ 0.73
SGCEO43556 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGCEO43556 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.63■□□□□ 0.73
SGCEO43556 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.63■□□□□ 0.73
SGCEO43556 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.63■□□□□ 0.73
SGCEO43556 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SGCEO43556 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SGCEO43556 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SGCEO43556 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SGCEO43556 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SGCEO43556 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGCEO43556 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.62■□□□□ 0.73
SGCEO43556 GUSBP5-201ENST00000418136 578 ntBASIC19.62■□□□□ 0.73
SGCEO43556 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
SGCEO43556 KRT16P3-201ENST00000439127 1283 ntBASIC19.62■□□□□ 0.73
SGCEO43556 MIR6724-1-201ENST00000616420 92 ntBASIC19.62■□□□□ 0.73
SGCEO43556 MIR6724-2-201ENST00000616483 92 ntBASIC19.62■□□□□ 0.73
SGCEO43556 MIR6724-4-201ENST00000617390 92 ntBASIC19.62■□□□□ 0.73
SGCEO43556 MIR6724-3-201ENST00000622482 92 ntBASIC19.62■□□□□ 0.73
SGCEO43556 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SGCEO43556 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SGCEO43556 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.61■□□□□ 0.73
SGCEO43556 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGCEO43556 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGCEO43556 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SGCEO43556 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.61■□□□□ 0.73
SGCEO43556 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGCEO43556 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SGCEO43556 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SGCEO43556 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.6■□□□□ 0.73
SGCEO43556 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.6■□□□□ 0.73
SGCEO43556 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.6■□□□□ 0.73
SGCEO43556 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SGCEO43556 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.6■□□□□ 0.73
SGCEO43556 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 AC144652.1-201ENST00000609974 1624 ntBASIC19.59■□□□□ 0.73
SGCEO43556 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 C9orf163-202ENST00000624034 2573 ntBASIC19.59■□□□□ 0.73
SGCEO43556 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SGCEO43556 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.59■□□□□ 0.73
SGCEO43556 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SGCEO43556 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.73
SGCEO43556 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.58■□□□□ 0.72
SGCEO43556 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SGCEO43556 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.58■□□□□ 0.72
SGCEO43556 AC068473.5-201ENST00000616428 2072 ntBASIC19.58■□□□□ 0.72
SGCEO43556 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SGCEO43556 AL353803.4-201ENST00000565882 1934 ntBASIC19.57■□□□□ 0.72
SGCEO43556 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SGCEO43556 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SGCEO43556 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.57■□□□□ 0.72
SGCEO43556 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.57■□□□□ 0.72
SGCEO43556 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SGCEO43556 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SGCEO43556 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.57■□□□□ 0.72
SGCEO43556 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.56■□□□□ 0.72
SGCEO43556 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SGCEO43556 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.56■□□□□ 0.72
SGCEO43556 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.56■□□□□ 0.72
SGCEO43556 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.56■□□□□ 0.72
SGCEO43556 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.56■□□□□ 0.72
SGCEO43556 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.56■□□□□ 0.72
SGCEO43556 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SGCEO43556 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.56■□□□□ 0.72
SGCEO43556 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SGCEO43556 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SGCEO43556 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.55■□□□□ 0.72
SGCEO43556 AC009102.2-201ENST00000606772 1639 ntBASIC19.55■□□□□ 0.72
SGCEO43556 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms