Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF11O14788 PBX2P1-201ENST00000493219 1291 ntBASIC20.04■□□□□ 0.8
TNFSF11O14788 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF11O14788 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.04■□□□□ 0.8
TNFSF11O14788 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TNFSF11O14788 DUX4L4-201ENST00000566884 1269 ntBASIC20.04■□□□□ 0.8
TNFSF11O14788 MIR3181-201ENST00000578512 73 ntBASIC20.04■□□□□ 0.8
TNFSF11O14788 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.04■□□□□ 0.8
TNFSF11O14788 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TNFSF11O14788 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
TNFSF11O14788 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF11O14788 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TNFSF11O14788 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TNFSF11O14788 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF11O14788 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF11O14788 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.03■□□□□ 0.8
TNFSF11O14788 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.03■□□□□ 0.8
TNFSF11O14788 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TNFSF11O14788 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TNFSF11O14788 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.8
TNFSF11O14788 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.02■□□□□ 0.8
TNFSF11O14788 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.02■□□□□ 0.8
TNFSF11O14788 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 AC092068.2-201ENST00000590491 1708 ntBASIC20.02■□□□□ 0.8
TNFSF11O14788 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TNFSF11O14788 AC024257.2-201ENST00000549699 147 ntBASIC20.02■□□□□ 0.8
TNFSF11O14788 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF11O14788 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF11O14788 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.02■□□□□ 0.8
TNFSF11O14788 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TNFSF11O14788 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF11O14788 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF11O14788 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.02■□□□□ 0.79
TNFSF11O14788 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TNFSF11O14788 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TNFSF11O14788 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF11O14788 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.01■□□□□ 0.79
TNFSF11O14788 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF11O14788 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TNFSF11O14788 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF11O14788 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.01■□□□□ 0.79
TNFSF11O14788 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.01■□□□□ 0.79
TNFSF11O14788 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.01■□□□□ 0.79
TNFSF11O14788 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.01■□□□□ 0.79
TNFSF11O14788 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TNFSF11O14788 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF11O14788 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20■□□□□ 0.79
TNFSF11O14788 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 AC106739.1-201ENST00000617035 715 ntBASIC20■□□□□ 0.79
TNFSF11O14788 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF11O14788 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF11O14788 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20■□□□□ 0.79
TNFSF11O14788 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF11O14788 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF11O14788 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TNFSF11O14788 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFSF11O14788 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFSF11O14788 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF11O14788 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF11O14788 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF11O14788 AL138724.1-201ENST00000606771 1088 ntBASIC19.99■□□□□ 0.79
TNFSF11O14788 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TNFSF11O14788 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TNFSF11O14788 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF11O14788 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TNFSF11O14788 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF11O14788 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF11O14788 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms