Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
COLCA2A8K830 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COLCA2A8K830 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COLCA2A8K830 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COLCA2A8K830 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA2A8K830 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.32■□□□□ 0.36
COLCA2A8K830 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.32■□□□□ 0.36
COLCA2A8K830 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
COLCA2A8K830 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COLCA2A8K830 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.31■□□□□ 0.36
COLCA2A8K830 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA2A8K830 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COLCA2A8K830 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA2A8K830 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
COLCA2A8K830 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
COLCA2A8K830 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
COLCA2A8K830 LINC00273-201ENST00000539813 1452 ntBASIC17.31■□□□□ 0.36
COLCA2A8K830 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COLCA2A8K830 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COLCA2A8K830 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.3■□□□□ 0.36
COLCA2A8K830 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.3■□□□□ 0.36
COLCA2A8K830 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.3■□□□□ 0.36
COLCA2A8K830 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
COLCA2A8K830 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COLCA2A8K830 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COLCA2A8K830 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COLCA2A8K830 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 AC010542.4-201ENST00000563151 1910 ntBASIC17.29■□□□□ 0.36
COLCA2A8K830 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
COLCA2A8K830 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.29■□□□□ 0.36
COLCA2A8K830 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 AC079630.1-202ENST00000618127 1840 ntBASIC17.29■□□□□ 0.36
COLCA2A8K830 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COLCA2A8K830 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.29■□□□□ 0.36
COLCA2A8K830 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COLCA2A8K830 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COLCA2A8K830 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COLCA2A8K830 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.28■□□□□ 0.36
COLCA2A8K830 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COLCA2A8K830 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.28■□□□□ 0.36
COLCA2A8K830 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.28■□□□□ 0.36
COLCA2A8K830 LINC01006-201ENST00000333319 2292 ntBASIC17.28■□□□□ 0.36
COLCA2A8K830 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
COLCA2A8K830 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COLCA2A8K830 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COLCA2A8K830 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.27■□□□□ 0.36
COLCA2A8K830 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.27■□□□□ 0.36
COLCA2A8K830 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.27■□□□□ 0.36
COLCA2A8K830 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA2A8K830 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA2A8K830 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
COLCA2A8K830 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA2A8K830 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA2A8K830 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA2A8K830 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA2A8K830 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.27■□□□□ 0.35
COLCA2A8K830 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.27■□□□□ 0.35
COLCA2A8K830 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COLCA2A8K830 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
COLCA2A8K830 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COLCA2A8K830 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA2A8K830 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.26■□□□□ 0.35
COLCA2A8K830 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms