Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCRBV9S1A1TA0A576 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
TCRBV9S1A1TA0A576 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 MIR4508-201ENST00000584178 70 ntBASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCRBV9S1A1TA0A576 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 SNX5-217ENST00000606557 1087 ntBASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 AC137767.1-201ENST00000602918 1920 ntBASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.48■■□□□ 1.19
TCRBV9S1A1TA0A576 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TCRBV9S1A1TA0A576 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 AC139530.1-201ENST00000575312 1977 ntBASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TCRBV9S1A1TA0A576 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
TCRBV9S1A1TA0A576 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 AC144652.1-201ENST00000609974 1624 ntBASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TCRBV9S1A1TA0A576 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
TCRBV9S1A1TA0A576 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TCRBV9S1A1TA0A576 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.44■■□□□ 1.18
TCRBV9S1A1TA0A576 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.44■■□□□ 1.18
TCRBV9S1A1TA0A576 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TCRBV9S1A1TA0A576 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 AC103834.1-201ENST00000520383 144 ntBASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
TCRBV9S1A1TA0A576 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TCRBV9S1A1TA0A576 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms