Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
A0A1W2PRF3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 DUX4L19-201ENST00000557448 1267 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 pRNA.6-201ENST00000610482 90 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 pRNA.5-201ENST00000612139 90 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 pRNA.11-201ENST00000618423 90 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 pRNA.13-201ENST00000619112 90 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 AC241377.3-202ENST00000626088 1088 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 AC241585.3-202ENST00000628937 1088 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 AC245100.8-202ENST00000629247 1058 ntBASIC18.26■□□□□ 0.51
A0A1W2PRF3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
A0A1W2PRF3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
A0A1W2PRF3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.26■□□□□ 0.51
A0A1W2PRF3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
A0A1W2PRF3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
A0A1W2PRF3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 AC093323.1-202ENST00000635031 2045 ntBASIC18.24■□□□□ 0.51
A0A1W2PRF3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.24■□□□□ 0.51
A0A1W2PRF3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
A0A1W2PRF3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.23■□□□□ 0.51
A0A1W2PRF3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.23■□□□□ 0.51
A0A1W2PRF3 AC142381.2-201ENST00000566120 298 ntBASIC18.23■□□□□ 0.51
A0A1W2PRF3 MIR4767-201ENST00000582827 78 ntBASIC18.23■□□□□ 0.51
A0A1W2PRF3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
A0A1W2PRF3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
A0A1W2PRF3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.22■□□□□ 0.51
A0A1W2PRF3 AC079630.1-202ENST00000618127 1840 ntBASIC18.22■□□□□ 0.51
A0A1W2PRF3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.22■□□□□ 0.51
A0A1W2PRF3 MIR3181-201ENST00000578512 73 ntBASIC18.22■□□□□ 0.51
A0A1W2PRF3 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.22■□□□□ 0.51
A0A1W2PRF3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.22■□□□□ 0.51
A0A1W2PRF3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
A0A1W2PRF3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.21■□□□□ 0.51
A0A1W2PRF3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
A0A1W2PRF3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.21■□□□□ 0.51
A0A1W2PRF3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
A0A1W2PRF3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.21■□□□□ 0.51
A0A1W2PRF3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
A0A1W2PRF3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
A0A1W2PRF3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
A0A1W2PRF3 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms