Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV21A0A0B4J279 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV21A0A0B4J279 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 AC242852.2-201ENST00000615738 1807 ntBASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV21A0A0B4J279 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV21A0A0B4J279 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV21A0A0B4J279 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV21A0A0B4J279 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
TRAV21A0A0B4J279 LINC00565-201ENST00000562710 2331 ntBASIC16.52■□□□□ 0.23
TRAV21A0A0B4J279 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV21A0A0B4J279 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV21A0A0B4J279 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV21A0A0B4J279 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 CLDN5-201ENST00000403084 2357 ntBASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV21A0A0B4J279 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms