Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RAP2CP1-202ENST00000605179 643 ntBASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 AC022413.1-201ENST00000624602 984 ntBASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV34A0A0B4J273 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 AC026202.3-201ENST00000600805 1127 ntBASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV34A0A0B4J273 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 AL161729.1-201ENST00000604104 1402 ntBASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV34A0A0B4J273 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 AC242852.2-201ENST00000615738 1807 ntBASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV34A0A0B4J273 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV34A0A0B4J273 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV34A0A0B4J273 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV34A0A0B4J273 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms