Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV24A0A0B4J272 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV24A0A0B4J272 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 MIR4787-201ENST00000607364 84 ntBASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV24A0A0B4J272 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
TRAV24A0A0B4J272 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV24A0A0B4J272 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 GUSBP5-202ENST00000510805 1989 ntBASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV24A0A0B4J272 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 EP400NL-214ENST00000641289 2402 ntBASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 AC239859.2-201ENST00000444165 318 ntBASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 AC009299.2-201ENST00000482477 511 ntBASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV24A0A0B4J272 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 MTDHP2-201ENST00000601468 714 ntBASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 AL451085.2-201ENST00000605085 799 ntBASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV24A0A0B4J272 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 LINC01529-204ENST00000636474 1715 ntBASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 ESRRAP2-201ENST00000418437 1549 ntBASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV24A0A0B4J272 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 FP325331.1-202ENST00000623531 1380 ntBASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV24A0A0B4J272 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms